RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
VAMP1-204ENST00000535180 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
VAMP1-204ENST00000535180 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
VAMP1-204ENST00000535180 GLTPD2A6NH11 291 aa15.42■□□□□ 0.06
VAMP1-204ENST00000535180 TMF1P82094 1093 aa15.42■□□□□ 0.06
VAMP1-204ENST00000535180 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
VAMP1-204ENST00000535180 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
VAMP1-204ENST00000535180 TIAM2Q8IVF5 1701 aa15.41■□□□□ 0.06
VAMP1-204ENST00000535180 LOC102724428A0A0B4J2F2 783 aa15.41■□□□□ 0.06
VAMP1-204ENST00000535180 HOXC9P31274 260 aa15.41■□□□□ 0.06
VAMP1-204ENST00000535180 SIK1P57059 783 aa15.41■□□□□ 0.06
VAMP1-204ENST00000535180 AIDAQ96BJ3 306 aa15.41■□□□□ 0.06
VAMP1-204ENST00000535180 RAPGEF4Q8WZA2 1011 aa15.4■□□□□ 0.06
VAMP1-204ENST00000535180 PDE4DIPQ5VU43 2346 aa15.4■□□□□ 0.06
VAMP1-204ENST00000535180 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-204ENST00000535180 LBX1P52954 281 aa15.39■□□□□ 0.05
VAMP1-204ENST00000535180 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
VAMP1-204ENST00000535180 NBPF6Q5VWK0 638 aa15.39■□□□□ 0.05
VAMP1-204ENST00000535180 PIGBQ92521 554 aa15.39■□□□□ 0.05
VAMP1-204ENST00000535180 NBPF4Q96M43 638 aa15.39■□□□□ 0.05
VAMP1-204ENST00000535180 PARP3Q9Y6F1 533 aa15.39■□□□□ 0.05
VAMP1-204ENST00000535180 CNTNAP1P78357 1384 aa15.38■□□□□ 0.05
VAMP1-204ENST00000535180 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
VAMP1-204ENST00000535180 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
VAMP1-204ENST00000535180 ITPK1Q13572 414 aa15.38■□□□□ 0.05
VAMP1-204ENST00000535180 MAP3K19Q56UN5 1328 aa15.38■□□□□ 0.05
VAMP1-204ENST00000535180 DICER1Q9UPY3 1922 aaKnown RBP15.37■□□□□ 0.05
VAMP1-204ENST00000535180 POTECB2RU33 542 aa15.37■□□□□ 0.05
VAMP1-204ENST00000535180 CYP27B1O15528 508 aa15.37■□□□□ 0.05
VAMP1-204ENST00000535180 AMPHP49418 695 aa15.37■□□□□ 0.05
VAMP1-204ENST00000535180 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
VAMP1-204ENST00000535180 ATP6V1AP38606 617 aa15.36■□□□□ 0.05
VAMP1-204ENST00000535180 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
VAMP1-204ENST00000535180 USHBP1Q8N6Y0 703 aa15.36■□□□□ 0.05
VAMP1-204ENST00000535180 WBP1LQ9NX94 342 aa15.36■□□□□ 0.05
VAMP1-204ENST00000535180 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
VAMP1-204ENST00000535180 GYS1P13807 737 aa15.35■□□□□ 0.05
VAMP1-204ENST00000535180 LMNB1P20700 586 aa15.35■□□□□ 0.05
VAMP1-204ENST00000535180 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
VAMP1-204ENST00000535180 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
VAMP1-204ENST00000535180 CCDC85CA6NKD9 419 aa15.34■□□□□ 0.05
VAMP1-204ENST00000535180 RASSF7Q02833 373 aa15.34■□□□□ 0.05
VAMP1-204ENST00000535180 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
VAMP1-204ENST00000535180 MYH14Q7Z406 1995 aaKnown RBP15.34■□□□□ 0.05
VAMP1-204ENST00000535180 ADRA2BP18089 450 aa15.33■□□□□ 0.04
VAMP1-204ENST00000535180 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
VAMP1-204ENST00000535180 DLEC1Q9Y238 1755 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 HSPA8P11142 646 aaKnown RBP15.32■□□□□ 0.04
VAMP1-204ENST00000535180 FBLN1P23142 703 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 CHRNA5P30532 468 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 VEGFBP49765 207 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
VAMP1-204ENST00000535180 TMC1Q8TDI8 760 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 ASAP1Q9ULH1 1129 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
VAMP1-204ENST00000535180 RFC4P35249 363 aa15.31■□□□□ 0.04
VAMP1-204ENST00000535180 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
VAMP1-204ENST00000535180 DPY19L2Q6NUT2 758 aa15.3■□□□□ 0.04
VAMP1-204ENST00000535180 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
VAMP1-204ENST00000535180 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
VAMP1-204ENST00000535180 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
VAMP1-204ENST00000535180 A0A1W2PP64 1363 aa15.29■□□□□ 0.04
VAMP1-204ENST00000535180 RC3H1Q5TC82 1133 aaKnown RBP15.29■□□□□ 0.04
VAMP1-204ENST00000535180 COG3Q96JB2 828 aa15.29■□□□□ 0.04
VAMP1-204ENST00000535180 PASKQ96RG2 1323 aa15.28■□□□□ 0.04
VAMP1-204ENST00000535180 AFDNP55196 1824 aaKnown RBP15.28■□□□□ 0.04
VAMP1-204ENST00000535180 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
VAMP1-204ENST00000535180 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
VAMP1-204ENST00000535180 KDRP35968 1356 aa15.26■□□□□ 0.03
VAMP1-204ENST00000535180 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
VAMP1-204ENST00000535180 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
VAMP1-204ENST00000535180 DDR1Q08345 913 aa15.26■□□□□ 0.03
VAMP1-204ENST00000535180 SCN4AP35499 1836 aa15.26■□□□□ 0.03
VAMP1-204ENST00000535180 FER1L6Q2WGJ9 1857 aa15.25■□□□□ 0.03
VAMP1-204ENST00000535180 CNTNAP4Q9C0A0 1308 aa15.25■□□□□ 0.03
VAMP1-204ENST00000535180 TMEM88BA6NKF7 163 aa15.25■□□□□ 0.03
VAMP1-204ENST00000535180 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-204ENST00000535180 RRS1Q15050 365 aaKnown RBP15.24■□□□□ 0.03
VAMP1-204ENST00000535180 SLC4A9Q96Q91 983 aa15.24■□□□□ 0.03
VAMP1-204ENST00000535180 FKBP8Q14318 412 aa15.23■□□□□ 0.03
VAMP1-204ENST00000535180 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
VAMP1-204ENST00000535180 ROCK2O75116 1388 aaKnown RBP15.23■□□□□ 0.03
VAMP1-204ENST00000535180 INSRP06213 1382 aa15.23■□□□□ 0.03
VAMP1-204ENST00000535180 NFKBIEO00221 500 aa15.22■□□□□ 0.03
VAMP1-204ENST00000535180 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
VAMP1-204ENST00000535180 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 RASSF10A6NK89 507 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 POLRMTO00411 1230 aaKnown RBP15.21■□□□□ 0.03
VAMP1-204ENST00000535180 ITGBL1O95965 494 aaPredicted RBP15.21■□□□□ 0.03
VAMP1-204ENST00000535180 TM4SF1P30408 202 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 DEFB115Q30KQ5 88 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 HSP90AB2PQ58FF8 381 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 TTLL6Q8N841 843 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
VAMP1-204ENST00000535180 SRP68Q9UHB9 627 aaKnown RBP15.21■□□□□ 0.03
VAMP1-204ENST00000535180 CASP8AP2Q9UKL3 1982 aa15.21■□□□□ 0.03
VAMP1-204ENST00000535180 ERFEQ4G0M1 354 aa15.2■□□□□ 0.02
VAMP1-204ENST00000535180 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
VAMP1-204ENST00000535180 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
VAMP1-204ENST00000535180 WDR33Q9C0J8 1336 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms