RNA–Protein interactions for RNA: ENST00000534958.5

PACRG-204, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-204ENST00000534958 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
PACRG-204ENST00000534958 DCTN1Q14203 1278 aa13.78□□□□□ -0.2
PACRG-204ENST00000534958 TAF7Q15545 349 aaPredicted RBP13.78□□□□□ -0.2
PACRG-204ENST00000534958 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
PACRG-204ENST00000534958 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
PACRG-204ENST00000534958 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
PACRG-204ENST00000534958 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
PACRG-204ENST00000534958 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
PACRG-204ENST00000534958 SYTL4Q96C24 671 aaPredicted RBP13.76□□□□□ -0.21
PACRG-204ENST00000534958 THUMPD2Q9BTF0 503 aaKnown RBP13.76□□□□□ -0.21
PACRG-204ENST00000534958 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
PACRG-204ENST00000534958 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
PACRG-204ENST00000534958 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
PACRG-204ENST00000534958 CHL1O00533 1208 aa13.74□□□□□ -0.21
PACRG-204ENST00000534958 NFATC2IPQ8NCF5 419 aa13.74□□□□□ -0.21
PACRG-204ENST00000534958 PAPPAQ13219 1627 aa13.74□□□□□ -0.21
PACRG-204ENST00000534958 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
PACRG-204ENST00000534958 HMGB2P26583 209 aaKnown RBP13.73□□□□□ -0.21
PACRG-204ENST00000534958 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
PACRG-204ENST00000534958 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
PACRG-204ENST00000534958 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
PACRG-204ENST00000534958 CHMP4AQ9BY43 222 aa13.73□□□□□ -0.21
PACRG-204ENST00000534958 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
PACRG-204ENST00000534958 BTAF1O14981 1849 aa13.72□□□□□ -0.21
PACRG-204ENST00000534958 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
PACRG-204ENST00000534958 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
PACRG-204ENST00000534958 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
PACRG-204ENST00000534958 FANCIQ9NVI1 1328 aa13.71□□□□□ -0.21
PACRG-204ENST00000534958 ZNF790Q6PG37 636 aa13.71□□□□□ -0.21
PACRG-204ENST00000534958 MBIPQ9NS73 344 aa13.71□□□□□ -0.21
PACRG-204ENST00000534958 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
PACRG-204ENST00000534958 PIGBQ92521 554 aa13.7□□□□□ -0.22
PACRG-204ENST00000534958 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
PACRG-204ENST00000534958 HOXB7P09629 217 aa13.69□□□□□ -0.22
PACRG-204ENST00000534958 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
PACRG-204ENST00000534958 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
PACRG-204ENST00000534958 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
PACRG-204ENST00000534958 DUSP27Q5VZP5 1158 aa13.68□□□□□ -0.22
PACRG-204ENST00000534958 TRMT2AQ8IZ69 625 aaKnown RBP13.68□□□□□ -0.22
PACRG-204ENST00000534958 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
PACRG-204ENST00000534958 ZNF428Q96B54 188 aa13.68□□□□□ -0.22
PACRG-204ENST00000534958 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
PACRG-204ENST00000534958 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
PACRG-204ENST00000534958 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
PACRG-204ENST00000534958 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
PACRG-204ENST00000534958 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
PACRG-204ENST00000534958 KCNQ2O43526 872 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 TRIM37O94972 964 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 EIF4A1P60842 406 aaKnown RBP13.67□□□□□ -0.22
PACRG-204ENST00000534958 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
PACRG-204ENST00000534958 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 PALLDQ8WX93 1383 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 LY75O60449 1722 aa13.67□□□□□ -0.22
PACRG-204ENST00000534958 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
PACRG-204ENST00000534958 KCPQ6ZWJ8 1503 aa13.66□□□□□ -0.22
PACRG-204ENST00000534958 CACNA1FO60840 1977 aa13.66□□□□□ -0.22
PACRG-204ENST00000534958 CICQ96RK0 1608 aaPredicted RBP13.66□□□□□ -0.22
PACRG-204ENST00000534958 SLC39A6Q13433 755 aa13.66□□□□□ -0.22
PACRG-204ENST00000534958 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
PACRG-204ENST00000534958 HEG1Q9ULI3 1381 aa13.66□□□□□ -0.22
PACRG-204ENST00000534958 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
PACRG-204ENST00000534958 EXOSC9Q06265 439 aaKnown RBP13.65□□□□□ -0.22
PACRG-204ENST00000534958 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
PACRG-204ENST00000534958 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
PACRG-204ENST00000534958 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
PACRG-204ENST00000534958 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
PACRG-204ENST00000534958 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
PACRG-204ENST00000534958 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
PACRG-204ENST00000534958 KCNQ3O43525 872 aa13.63□□□□□ -0.23
PACRG-204ENST00000534958 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
PACRG-204ENST00000534958 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
PACRG-204ENST00000534958 SIK1P57059 783 aa13.63□□□□□ -0.23
PACRG-204ENST00000534958 EP400Q96L91 3159 aa13.63□□□□□ -0.23
PACRG-204ENST00000534958 PLSCR1O15162 318 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 STARD3NLO95772 234 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 APBA3O96018 575 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 BAG6P46379 1132 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 C5P01031 1676 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 ERBB4Q15303 1308 aa13.62□□□□□ -0.23
PACRG-204ENST00000534958 TJP1Q07157 1748 aa13.61□□□□□ -0.23
PACRG-204ENST00000534958 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
PACRG-204ENST00000534958 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
PACRG-204ENST00000534958 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
PACRG-204ENST00000534958 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
PACRG-204ENST00000534958 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
PACRG-204ENST00000534958 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
PACRG-204ENST00000534958 ALDH1L2Q3SY69 923 aa13.6□□□□□ -0.23
PACRG-204ENST00000534958 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
PACRG-204ENST00000534958 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
PACRG-204ENST00000534958 ELL2O00472 640 aaPredicted RBP13.59□□□□□ -0.23
PACRG-204ENST00000534958 VAMP4O75379 141 aa13.59□□□□□ -0.23
PACRG-204ENST00000534958 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
PACRG-204ENST00000534958 KRT24Q2M2I5 525 aa13.58□□□□□ -0.24
PACRG-204ENST00000534958 PTF1AQ7RTS3 328 aa13.58□□□□□ -0.24
PACRG-204ENST00000534958 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
PACRG-204ENST00000534958 TSPYL6Q8N831 410 aa13.58□□□□□ -0.24
PACRG-204ENST00000534958 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms