RNA–Protein interactions for RNA: ENST00000534856.1

AP003108.1-201, humanhuman

TSL 4 BASIC

Gene AP003108.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.1-201ENST00000534856 LRRC4BQ9NT99 713 aa17.2■□□□□ 0.34
AP003108.1-201ENST00000534856 NUP188Q5SRE5 1749 aa17.2■□□□□ 0.34
AP003108.1-201ENST00000534856 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
AP003108.1-201ENST00000534856 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
AP003108.1-201ENST00000534856 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
AP003108.1-201ENST00000534856 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
AP003108.1-201ENST00000534856 RRP7AQ9Y3A4 280 aaKnown RBP17.18■□□□□ 0.34
AP003108.1-201ENST00000534856 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 LY75O60449 1722 aa17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 RIPK4P57078 832 aa17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 TEFQ10587 303 aa17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 SLC27A3Q5K4L6 730 aa17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
AP003108.1-201ENST00000534856 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
AP003108.1-201ENST00000534856 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
AP003108.1-201ENST00000534856 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
AP003108.1-201ENST00000534856 LOC102724428A0A0B4J2F2 783 aa17.15■□□□□ 0.34
AP003108.1-201ENST00000534856 PSDA5PKW4 1024 aaPredicted RBP17.15■□□□□ 0.34
AP003108.1-201ENST00000534856 SIK1P57059 783 aa17.15■□□□□ 0.34
AP003108.1-201ENST00000534856 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
AP003108.1-201ENST00000534856 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
AP003108.1-201ENST00000534856 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.34
AP003108.1-201ENST00000534856 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
AP003108.1-201ENST00000534856 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
AP003108.1-201ENST00000534856 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
AP003108.1-201ENST00000534856 APAF1O14727 1248 aa17.13■□□□□ 0.33
AP003108.1-201ENST00000534856 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
AP003108.1-201ENST00000534856 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
AP003108.1-201ENST00000534856 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
AP003108.1-201ENST00000534856 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
AP003108.1-201ENST00000534856 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
AP003108.1-201ENST00000534856 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
AP003108.1-201ENST00000534856 ITPK1Q13572 414 aa17.12■□□□□ 0.33
AP003108.1-201ENST00000534856 MIER1Q8N108 512 aa17.12■□□□□ 0.33
AP003108.1-201ENST00000534856 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
AP003108.1-201ENST00000534856 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
AP003108.1-201ENST00000534856 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
AP003108.1-201ENST00000534856 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
AP003108.1-201ENST00000534856 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
AP003108.1-201ENST00000534856 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
AP003108.1-201ENST00000534856 KCNQ3O43525 872 aa17.1■□□□□ 0.33
AP003108.1-201ENST00000534856 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
AP003108.1-201ENST00000534856 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
AP003108.1-201ENST00000534856 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
AP003108.1-201ENST00000534856 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
AP003108.1-201ENST00000534856 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
AP003108.1-201ENST00000534856 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
AP003108.1-201ENST00000534856 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
AP003108.1-201ENST00000534856 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
AP003108.1-201ENST00000534856 C5P01031 1676 aa17.08■□□□□ 0.32
AP003108.1-201ENST00000534856 ZNF496Q96IT1 587 aaPredicted RBP17.07■□□□□ 0.32
AP003108.1-201ENST00000534856 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
AP003108.1-201ENST00000534856 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
AP003108.1-201ENST00000534856 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
AP003108.1-201ENST00000534856 C4BP0C0L5 1744 aa17.06■□□□□ 0.32
AP003108.1-201ENST00000534856 ZNF831Q5JPB2 1677 aa17.06■□□□□ 0.32
AP003108.1-201ENST00000534856 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
AP003108.1-201ENST00000534856 AK7Q96M32 723 aa17.05■□□□□ 0.32
AP003108.1-201ENST00000534856 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
AP003108.1-201ENST00000534856 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
AP003108.1-201ENST00000534856 TJP1Q07157 1748 aa17.04■□□□□ 0.32
AP003108.1-201ENST00000534856 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
AP003108.1-201ENST00000534856 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
AP003108.1-201ENST00000534856 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
AP003108.1-201ENST00000534856 PNPLA7Q6ZV29 1317 aa17.03■□□□□ 0.32
AP003108.1-201ENST00000534856 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
AP003108.1-201ENST00000534856 AMIGO3Q86WK7 504 aa17.03■□□□□ 0.32
AP003108.1-201ENST00000534856 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
AP003108.1-201ENST00000534856 GNPATO15228 680 aa17.02■□□□□ 0.32
AP003108.1-201ENST00000534856 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
AP003108.1-201ENST00000534856 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
AP003108.1-201ENST00000534856 LAS1LQ9Y4W2 734 aaKnown RBP17.02■□□□□ 0.32
AP003108.1-201ENST00000534856 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
AP003108.1-201ENST00000534856 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
AP003108.1-201ENST00000534856 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
AP003108.1-201ENST00000534856 PHF14O94880 888 aa17.01■□□□□ 0.31
AP003108.1-201ENST00000534856 CYP19A1P11511 503 aaPredicted RBP17.01■□□□□ 0.31
AP003108.1-201ENST00000534856 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
AP003108.1-201ENST00000534856 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
AP003108.1-201ENST00000534856 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
AP003108.1-201ENST00000534856 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
AP003108.1-201ENST00000534856 CCDC27Q2M243 656 aa17■□□□□ 0.31
AP003108.1-201ENST00000534856 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
AP003108.1-201ENST00000534856 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
AP003108.1-201ENST00000534856 CASZ1Q86V15 1759 aa17■□□□□ 0.31
AP003108.1-201ENST00000534856 CHL1O00533 1208 aa16.99■□□□□ 0.31
AP003108.1-201ENST00000534856 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
AP003108.1-201ENST00000534856 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
AP003108.1-201ENST00000534856 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
AP003108.1-201ENST00000534856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 MSH5O43196 834 aa16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 CFAP44Q96MT7 982 aa16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 CCDC87Q9NVE4 849 aa16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
AP003108.1-201ENST00000534856 QSER1Q2KHR3 1735 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms