RNA–Protein interactions for RNA: ENST00000534829.5

SSPN-203, Transcript of sarcospan, humanhuman

TSL 3

Gene SSPN, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-203ENST00000534829 CCDC87Q9NVE4 849 aa14.02□□□□□ -0.17
SSPN-203ENST00000534829 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
SSPN-203ENST00000534829 KTN1Q86UP2 1357 aaKnown RBP14□□□□□ -0.17
SSPN-203ENST00000534829 GNPATO15228 680 aa14□□□□□ -0.17
SSPN-203ENST00000534829 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
SSPN-203ENST00000534829 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
SSPN-203ENST00000534829 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
SSPN-203ENST00000534829 NBPF1Q3BBV0 1214 aa13.99□□□□□ -0.17
SSPN-203ENST00000534829 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
SSPN-203ENST00000534829 NME9Q86XW9 330 aa13.99□□□□□ -0.17
SSPN-203ENST00000534829 CCDC88AQ3V6T2 1871 aa13.99□□□□□ -0.17
SSPN-203ENST00000534829 TMF1P82094 1093 aa13.98□□□□□ -0.17
SSPN-203ENST00000534829 NLGN1Q8N2Q7 840 aa13.98□□□□□ -0.17
SSPN-203ENST00000534829 IP6K1Q92551 441 aa13.98□□□□□ -0.17
SSPN-203ENST00000534829 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
SSPN-203ENST00000534829 PASKQ96RG2 1323 aa13.97□□□□□ -0.17
SSPN-203ENST00000534829 LMNB1P20700 586 aa13.97□□□□□ -0.17
SSPN-203ENST00000534829 ITPK1Q13572 414 aa13.97□□□□□ -0.17
SSPN-203ENST00000534829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.17
SSPN-203ENST00000534829 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
SSPN-203ENST00000534829 SIK1P57059 783 aa13.96□□□□□ -0.17
SSPN-203ENST00000534829 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
SSPN-203ENST00000534829 GYS1P13807 737 aa13.95□□□□□ -0.18
SSPN-203ENST00000534829 CHRNA5P30532 468 aa13.95□□□□□ -0.18
SSPN-203ENST00000534829 SBNO2Q9Y2G9 1366 aa13.95□□□□□ -0.18
SSPN-203ENST00000534829 EVC2Q86UK5 1308 aa13.94□□□□□ -0.18
SSPN-203ENST00000534829 PIGBQ92521 554 aa13.94□□□□□ -0.18
SSPN-203ENST00000534829 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
SSPN-203ENST00000534829 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
SSPN-203ENST00000534829 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
SSPN-203ENST00000534829 CGNL1Q0VF96 1302 aa13.92□□□□□ -0.18
SSPN-203ENST00000534829 TMEM88BA6NKF7 163 aa13.92□□□□□ -0.18
SSPN-203ENST00000534829 PRPF38BQ5VTL8 546 aaKnown RBP13.92□□□□□ -0.18
SSPN-203ENST00000534829 CD163L1Q9NR16 1453 aa13.92□□□□□ -0.18
SSPN-203ENST00000534829 PCDH11XQ9BZA7 1347 aa13.91□□□□□ -0.18
SSPN-203ENST00000534829 PCDH11YQ9BZA8 1340 aa13.91□□□□□ -0.18
SSPN-203ENST00000534829 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
SSPN-203ENST00000534829 CYP27B1O15528 508 aa13.91□□□□□ -0.18
SSPN-203ENST00000534829 MCOLN1Q9GZU1 580 aa13.91□□□□□ -0.18
SSPN-203ENST00000534829 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
SSPN-203ENST00000534829 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
SSPN-203ENST00000534829 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
SSPN-203ENST00000534829 DICER1Q9UPY3 1922 aaKnown RBP13.9□□□□□ -0.18
SSPN-203ENST00000534829 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
SSPN-203ENST00000534829 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.19
SSPN-203ENST00000534829 DLEC1Q9Y238 1755 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 NFKBIEO00221 500 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 ITGBL1O95965 494 aaPredicted RBP13.89□□□□□ -0.19
SSPN-203ENST00000534829 HOXC9P31274 260 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 DDR1Q08345 913 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
SSPN-203ENST00000534829 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
SSPN-203ENST00000534829 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
SSPN-203ENST00000534829 DPY19L2Q6NUT2 758 aa13.88□□□□□ -0.19
SSPN-203ENST00000534829 RAPGEF4Q8WZA2 1011 aa13.88□□□□□ -0.19
SSPN-203ENST00000534829 ASAP1Q9ULH1 1129 aa13.88□□□□□ -0.19
SSPN-203ENST00000534829 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
SSPN-203ENST00000534829 CASP8AP2Q9UKL3 1982 aa13.87□□□□□ -0.19
SSPN-203ENST00000534829 ADRA2BP18089 450 aa13.87□□□□□ -0.19
SSPN-203ENST00000534829 DEFB115Q30KQ5 88 aa13.87□□□□□ -0.19
SSPN-203ENST00000534829 KDRP35968 1356 aa13.86□□□□□ -0.19
SSPN-203ENST00000534829 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
SSPN-203ENST00000534829 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
SSPN-203ENST00000534829 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
SSPN-203ENST00000534829 RFC4P35249 363 aa13.85□□□□□ -0.19
SSPN-203ENST00000534829 TSKSQ9UJT2 592 aa13.85□□□□□ -0.19
SSPN-203ENST00000534829 ZNF831Q5JPB2 1677 aa13.85□□□□□ -0.19
SSPN-203ENST00000534829 ADAMTSL1Q8N6G6 1762 aa13.84□□□□□ -0.19
SSPN-203ENST00000534829 EDC4Q6P2E9 1401 aaKnown RBP13.84□□□□□ -0.19
SSPN-203ENST00000534829 SCN4AP35499 1836 aa13.83□□□□□ -0.2
SSPN-203ENST00000534829 DDNO94850 711 aaPredicted RBP13.83□□□□□ -0.2
SSPN-203ENST00000534829 FBLN1P23142 703 aa13.83□□□□□ -0.2
SSPN-203ENST00000534829 FKBP8Q14318 412 aa13.83□□□□□ -0.2
SSPN-203ENST00000534829 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
SSPN-203ENST00000534829 AMPHP49418 695 aa13.82□□□□□ -0.2
SSPN-203ENST00000534829 NKX1-1Q15270 411 aaPredicted RBP13.82□□□□□ -0.2
SSPN-203ENST00000534829 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
SSPN-203ENST00000534829 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
SSPN-203ENST00000534829 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
SSPN-203ENST00000534829 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
SSPN-203ENST00000534829 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
SSPN-203ENST00000534829 POLRMTO00411 1230 aaKnown RBP13.81□□□□□ -0.2
SSPN-203ENST00000534829 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
SSPN-203ENST00000534829 SOX10P56693 466 aa13.81□□□□□ -0.2
SSPN-203ENST00000534829 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
SSPN-203ENST00000534829 BEGAINQ9BUH8 593 aa13.81□□□□□ -0.2
SSPN-203ENST00000534829 TAF1DQ9H5J8 278 aaPredicted RBP13.81□□□□□ -0.2
SSPN-203ENST00000534829 CNTNAP4Q9C0A0 1308 aa13.81□□□□□ -0.2
SSPN-203ENST00000534829 RTL1A6NKG5 1358 aa13.81□□□□□ -0.2
SSPN-203ENST00000534829 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
SSPN-203ENST00000534829 DGKZQ13574 1117 aa13.8□□□□□ -0.2
SSPN-203ENST00000534829 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
SSPN-203ENST00000534829 ABT1Q9ULW3 272 aaKnown RBP13.8□□□□□ -0.2
SSPN-203ENST00000534829 USP42Q9H9J4 1324 aaKnown RBP13.8□□□□□ -0.2
SSPN-203ENST00000534829 TTLL6Q8N841 843 aa13.79□□□□□ -0.2
SSPN-203ENST00000534829 CAPNS2Q96L46 248 aa13.79□□□□□ -0.2
SSPN-203ENST00000534829 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
SSPN-203ENST00000534829 NRXN2Q9P2S2 1712 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms