RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 LINC00116Q8NCU8 138 aa24.01■■□□□ 1.43
CAPRIN1-217ENST00000534825 PPP1R1BQ9UD71 204 aaPredicted RBP24.01■■□□□ 1.43
CAPRIN1-217ENST00000534825 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
CAPRIN1-217ENST00000534825 AMIGO3Q86WK7 504 aa24■■□□□ 1.43
CAPRIN1-217ENST00000534825 RSPH6AQ9H0K4 717 aa24■■□□□ 1.43
CAPRIN1-217ENST00000534825 PHACTR3Q96KR7 559 aa23.99■■□□□ 1.43
CAPRIN1-217ENST00000534825 SLC52A2Q9HAB3 445 aa23.98■■□□□ 1.43
CAPRIN1-217ENST00000534825 RBM42Q9BTD8 480 aaKnown RBP23.97■■□□□ 1.43
CAPRIN1-217ENST00000534825 QSER1Q2KHR3 1735 aa23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 FCHSD2O94868 740 aa23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 U2AF1L5P0DN76 240 aaPredicted RBP23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 PRKAR2BP31323 418 aa23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 U2AF1Q01081 240 aaKnown RBP eCLIP23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 SMIM5Q71RC9 77 aa23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 TAF1LQ8IZX4 1826 aa23.96■■□□□ 1.43
CAPRIN1-217ENST00000534825 C5P01031 1676 aa23.95■■□□□ 1.43
CAPRIN1-217ENST00000534825 FLAD1Q8NFF5 587 aa23.95■■□□□ 1.42
CAPRIN1-217ENST00000534825 IL17REQ8NFR9 667 aa23.95■■□□□ 1.42
CAPRIN1-217ENST00000534825 GAS2L2Q8NHY3 880 aa23.95■■□□□ 1.42
CAPRIN1-217ENST00000534825 AK7Q96M32 723 aa23.95■■□□□ 1.42
CAPRIN1-217ENST00000534825 TUBGCP6Q96RT7 1819 aa23.94■■□□□ 1.42
CAPRIN1-217ENST00000534825 MSH5O43196 834 aa23.94■■□□□ 1.42
CAPRIN1-217ENST00000534825 RALBP1Q15311 655 aa23.94■■□□□ 1.42
CAPRIN1-217ENST00000534825 ARXQ96QS3 562 aa23.94■■□□□ 1.42
CAPRIN1-217ENST00000534825 PTCD1O75127 700 aaKnown RBP23.93■■□□□ 1.42
CAPRIN1-217ENST00000534825 C4BP0C0L5 1744 aa23.93■■□□□ 1.42
CAPRIN1-217ENST00000534825 GNAT3A8MTJ3 354 aa23.92■■□□□ 1.42
CAPRIN1-217ENST00000534825 SCN11AQ9UI33 1791 aa23.92■■□□□ 1.42
CAPRIN1-217ENST00000534825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.91■■□□□ 1.42
CAPRIN1-217ENST00000534825 RC3H1Q5TC82 1133 aaKnown RBP23.91■■□□□ 1.42
CAPRIN1-217ENST00000534825 SYT17Q9BSW7 474 aa23.91■■□□□ 1.42
CAPRIN1-217ENST00000534825 FHDC1Q9C0D6 1143 aaPredicted RBP23.91■■□□□ 1.42
CAPRIN1-217ENST00000534825 SSFA2P28290 1259 aa23.9■■□□□ 1.42
CAPRIN1-217ENST00000534825 SLC39A6Q13433 755 aa23.9■■□□□ 1.42
CAPRIN1-217ENST00000534825 MAP3K5Q99683 1374 aa23.9■■□□□ 1.42
CAPRIN1-217ENST00000534825 GNPATO15228 680 aa23.89■■□□□ 1.41
CAPRIN1-217ENST00000534825 MRC1P22897 1456 aa23.88■■□□□ 1.41
CAPRIN1-217ENST00000534825 PHF14O94880 888 aa23.88■■□□□ 1.41
CAPRIN1-217ENST00000534825 POLD1P28340 1107 aa23.88■■□□□ 1.41
CAPRIN1-217ENST00000534825 ADAMTS7Q9UKP4 1686 aa23.88■■□□□ 1.41
CAPRIN1-217ENST00000534825 MSL1Q68DK7 614 aa23.87■■□□□ 1.41
CAPRIN1-217ENST00000534825 CNTNAP4Q9C0A0 1308 aa23.86■■□□□ 1.41
CAPRIN1-217ENST00000534825 ZNF831Q5JPB2 1677 aa23.86■■□□□ 1.41
CAPRIN1-217ENST00000534825 COL24A1Q17RW2 1714 aa23.86■■□□□ 1.41
CAPRIN1-217ENST00000534825 RPS6KA4O75676 772 aa23.85■■□□□ 1.41
CAPRIN1-217ENST00000534825 RTCBQ9Y3I0 505 aaKnown RBP23.85■■□□□ 1.41
CAPRIN1-217ENST00000534825 CEMIPQ8WUJ3 1361 aa23.85■■□□□ 1.41
CAPRIN1-217ENST00000534825 UBR3Q6ZT12 1888 aa23.84■■□□□ 1.41
CAPRIN1-217ENST00000534825 PLEKHF1Q96S99 279 aa23.84■■□□□ 1.41
CAPRIN1-217ENST00000534825 CRKLP46109 303 aaKnown RBP23.83■■□□□ 1.41
CAPRIN1-217ENST00000534825 TRAPPC3LQ5T215 181 aa23.83■■□□□ 1.41
CAPRIN1-217ENST00000534825 TEFQ10587 303 aa23.82■■□□□ 1.4
CAPRIN1-217ENST00000534825 INTS5Q6P9B9 1019 aaKnown RBP23.82■■□□□ 1.4
CAPRIN1-217ENST00000534825 DNAJC10Q8IXB1 793 aa23.82■■□□□ 1.4
CAPRIN1-217ENST00000534825 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
CAPRIN1-217ENST00000534825 MYBBP1AQ9BQG0 1328 aaKnown RBP23.81■■□□□ 1.4
CAPRIN1-217ENST00000534825 HTATSF1O43719 755 aaKnown RBP23.8■■□□□ 1.4
CAPRIN1-217ENST00000534825 ADRA2BP18089 450 aa23.8■■□□□ 1.4
CAPRIN1-217ENST00000534825 ZNF790Q6PG37 636 aa23.8■■□□□ 1.4
CAPRIN1-217ENST00000534825 VSIG10Q8N0Z9 540 aa23.8■■□□□ 1.4
CAPRIN1-217ENST00000534825 MYH14Q7Z406 1995 aaKnown RBP23.8■■□□□ 1.4
CAPRIN1-217ENST00000534825 CYP19A1P11511 503 aaPredicted RBP23.79■■□□□ 1.4
CAPRIN1-217ENST00000534825 MCM10Q7L590 875 aa23.79■■□□□ 1.4
CAPRIN1-217ENST00000534825 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
CAPRIN1-217ENST00000534825 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
CAPRIN1-217ENST00000534825 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
CAPRIN1-217ENST00000534825 COL5A3P25940 1745 aaPredicted RBP23.78■■□□□ 1.4
CAPRIN1-217ENST00000534825 VIRMAQ69YN4 1812 aaKnown RBP23.77■■□□□ 1.4
CAPRIN1-217ENST00000534825 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
CAPRIN1-217ENST00000534825 DCTN1Q14203 1278 aa23.77■■□□□ 1.4
CAPRIN1-217ENST00000534825 RTF1Q92541 710 aaKnown RBP23.77■■□□□ 1.4
CAPRIN1-217ENST00000534825 KCNQ3O43525 872 aa23.76■■□□□ 1.39
CAPRIN1-217ENST00000534825 TTC5Q8N0Z6 440 aa23.76■■□□□ 1.39
CAPRIN1-217ENST00000534825 BTBD11A6QL63 1104 aa23.75■■□□□ 1.39
CAPRIN1-217ENST00000534825 RFC4P35249 363 aa23.75■■□□□ 1.39
CAPRIN1-217ENST00000534825 CCDC87Q9NVE4 849 aa23.75■■□□□ 1.39
CAPRIN1-217ENST00000534825 TJP1Q07157 1748 aa23.74■■□□□ 1.39
CAPRIN1-217ENST00000534825 KLHL34Q8N239 644 aa23.74■■□□□ 1.39
CAPRIN1-217ENST00000534825 NLGN2Q8NFZ4 835 aa23.74■■□□□ 1.39
CAPRIN1-217ENST00000534825 PNNQ9H307 717 aaKnown RBP23.74■■□□□ 1.39
CAPRIN1-217ENST00000534825 CICQ96RK0 1608 aaPredicted RBP23.73■■□□□ 1.39
CAPRIN1-217ENST00000534825 NEFMP07197 916 aa23.73■■□□□ 1.39
CAPRIN1-217ENST00000534825 GYS1P13807 737 aa23.73■■□□□ 1.39
CAPRIN1-217ENST00000534825 NLGN1Q8N2Q7 840 aa23.73■■□□□ 1.39
CAPRIN1-217ENST00000534825 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
CAPRIN1-217ENST00000534825 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
CAPRIN1-217ENST00000534825 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
CAPRIN1-217ENST00000534825 HEG1Q9ULI3 1381 aa23.71■■□□□ 1.39
CAPRIN1-217ENST00000534825 SOS1Q07889 1333 aaPredicted RBP23.71■■□□□ 1.39
CAPRIN1-217ENST00000534825 ZBTB1Q9Y2K1 713 aa23.71■■□□□ 1.39
CAPRIN1-217ENST00000534825 UTRNP46939 3433 aa23.71■■□□□ 1.39
CAPRIN1-217ENST00000534825 SIPA1L3O60292 1781 aaPredicted RBP23.7■■□□□ 1.39
CAPRIN1-217ENST00000534825 MMP10P09238 476 aa23.7■■□□□ 1.38
CAPRIN1-217ENST00000534825 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.38
CAPRIN1-217ENST00000534825 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
CAPRIN1-217ENST00000534825 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.38
CAPRIN1-217ENST00000534825 SRP68Q9UHB9 627 aaKnown RBP23.7■■□□□ 1.38
CAPRIN1-217ENST00000534825 STARD3NLO95772 234 aa23.69■■□□□ 1.38
CAPRIN1-217ENST00000534825 UBR2Q8IWV8 1755 aa23.69■■□□□ 1.38
CAPRIN1-217ENST00000534825 USP42Q9H9J4 1324 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms