RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
CCS-209ENST00000534763 ZNF831Q5JPB2 1677 aa17.18■□□□□ 0.34
CCS-209ENST00000534763 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
CCS-209ENST00000534763 NEFMP07197 916 aa17.18■□□□□ 0.34
CCS-209ENST00000534763 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
CCS-209ENST00000534763 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
CCS-209ENST00000534763 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
CCS-209ENST00000534763 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
CCS-209ENST00000534763 KCNQ4P56696 695 aa17.16■□□□□ 0.34
CCS-209ENST00000534763 IL17REQ8NFR9 667 aa17.16■□□□□ 0.34
CCS-209ENST00000534763 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
CCS-209ENST00000534763 SLC16A10Q8TF71 515 aa17.15■□□□□ 0.34
CCS-209ENST00000534763 SPON1Q9HCB6 807 aa17.15■□□□□ 0.34
CCS-209ENST00000534763 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
CCS-209ENST00000534763 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
CCS-209ENST00000534763 C5P01031 1676 aa17.14■□□□□ 0.33
CCS-209ENST00000534763 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
CCS-209ENST00000534763 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
CCS-209ENST00000534763 TEFQ10587 303 aa17.13■□□□□ 0.33
CCS-209ENST00000534763 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
CCS-209ENST00000534763 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
CCS-209ENST00000534763 ITPK1Q13572 414 aa17.12■□□□□ 0.33
CCS-209ENST00000534763 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
CCS-209ENST00000534763 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
CCS-209ENST00000534763 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
CCS-209ENST00000534763 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
CCS-209ENST00000534763 CICQ96RK0 1608 aaPredicted RBP17.11■□□□□ 0.33
CCS-209ENST00000534763 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
CCS-209ENST00000534763 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
CCS-209ENST00000534763 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
CCS-209ENST00000534763 LINC00116Q8NCU8 138 aa17.11■□□□□ 0.33
CCS-209ENST00000534763 AK7Q96M32 723 aa17.11■□□□□ 0.33
CCS-209ENST00000534763 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
CCS-209ENST00000534763 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
CCS-209ENST00000534763 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
CCS-209ENST00000534763 ANP32CO43423 234 aa17.1■□□□□ 0.33
CCS-209ENST00000534763 WDR43Q15061 677 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCS-209ENST00000534763 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
CCS-209ENST00000534763 SSFA2P28290 1259 aa17.09■□□□□ 0.33
CCS-209ENST00000534763 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
CCS-209ENST00000534763 ZNF790Q6PG37 636 aa17.08■□□□□ 0.32
CCS-209ENST00000534763 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.32
CCS-209ENST00000534763 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
CCS-209ENST00000534763 ZBTB7AO95365 584 aa17.07■□□□□ 0.32
CCS-209ENST00000534763 PTGER2P43116 358 aa17.07■□□□□ 0.32
CCS-209ENST00000534763 COL23A1Q86Y22 540 aaPredicted RBP17.07■□□□□ 0.32
CCS-209ENST00000534763 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
CCS-209ENST00000534763 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
CCS-209ENST00000534763 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
CCS-209ENST00000534763 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
CCS-209ENST00000534763 ADRA2BP18089 450 aa17.06■□□□□ 0.32
CCS-209ENST00000534763 SLC39A6Q13433 755 aa17.06■□□□□ 0.32
CCS-209ENST00000534763 MCM10Q7L590 875 aa17.06■□□□□ 0.32
CCS-209ENST00000534763 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
CCS-209ENST00000534763 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
CCS-209ENST00000534763 GNPATO15228 680 aa17.05■□□□□ 0.32
CCS-209ENST00000534763 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
CCS-209ENST00000534763 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
CCS-209ENST00000534763 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
CCS-209ENST00000534763 COL5A3P25940 1745 aaPredicted RBP17.04■□□□□ 0.32
CCS-209ENST00000534763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.04■□□□□ 0.32
CCS-209ENST00000534763 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
CCS-209ENST00000534763 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
CCS-209ENST00000534763 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
CCS-209ENST00000534763 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
CCS-209ENST00000534763 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
CCS-209ENST00000534763 TUBGCP6Q96RT7 1819 aa17.04■□□□□ 0.32
CCS-209ENST00000534763 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
CCS-209ENST00000534763 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
CCS-209ENST00000534763 COL24A1Q17RW2 1714 aa17.03■□□□□ 0.32
CCS-209ENST00000534763 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 TJP1Q07157 1748 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 CYP19A1P11511 503 aaPredicted RBP17.02■□□□□ 0.32
CCS-209ENST00000534763 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.32
CCS-209ENST00000534763 RIPK4P57078 832 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.32
CCS-209ENST00000534763 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.32
CCS-209ENST00000534763 MSH5O43196 834 aa17.01■□□□□ 0.31
CCS-209ENST00000534763 STARD3NLO95772 234 aa17.01■□□□□ 0.31
CCS-209ENST00000534763 POLD1P28340 1107 aa17.01■□□□□ 0.31
CCS-209ENST00000534763 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
CCS-209ENST00000534763 INTS5Q6P9B9 1019 aaKnown RBP17.01■□□□□ 0.31
CCS-209ENST00000534763 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
CCS-209ENST00000534763 CCDC87Q9NVE4 849 aa17.01■□□□□ 0.31
CCS-209ENST00000534763 PPP1R1BQ9UD71 204 aaPredicted RBP17.01■□□□□ 0.31
CCS-209ENST00000534763 PHF14O94880 888 aa16.99■□□□□ 0.31
CCS-209ENST00000534763 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
CCS-209ENST00000534763 ARXQ96QS3 562 aa16.99■□□□□ 0.31
CCS-209ENST00000534763 ARHGEF1Q92888 912 aaKnown RBP16.98■□□□□ 0.31
CCS-209ENST00000534763 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
CCS-209ENST00000534763 KCNQ3O43525 872 aa16.97■□□□□ 0.31
CCS-209ENST00000534763 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
CCS-209ENST00000534763 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
CCS-209ENST00000534763 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
CCS-209ENST00000534763 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
CCS-209ENST00000534763 RFC4P35249 363 aa16.96■□□□□ 0.31
CCS-209ENST00000534763 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms