RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 ZMYND15Q9H091 742 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 SMC4Q9NTJ3 1288 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 GLI3P10071 1580 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 ERBB3P21860 1342 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 AFF2P51816 1311 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 HSP90AB1P08238 724 aaKnown RBP11.08□□□□□ -0.64
SORL1-213ENST00000534754 FNBP4Q8N3X1 1017 aaPredicted RBP11.08□□□□□ -0.64
SORL1-213ENST00000534754 NGLY1Q96IV0 654 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 SHANK3Q9BYB0 1731 aa11.08□□□□□ -0.64
SORL1-213ENST00000534754 BRWD3Q6RI45 1802 aa11.07□□□□□ -0.64
SORL1-213ENST00000534754 RAB3GAP1Q15042 981 aa11.07□□□□□ -0.64
SORL1-213ENST00000534754 ITPRIPQ8IWB1 547 aa11.07□□□□□ -0.64
SORL1-213ENST00000534754 TRIM27P14373 513 aa11.07□□□□□ -0.64
SORL1-213ENST00000534754 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
SORL1-213ENST00000534754 GAS2L3Q86XJ1 694 aa11.06□□□□□ -0.64
SORL1-213ENST00000534754 LTV1Q96GA3 475 aaPredicted RBP11.06□□□□□ -0.64
SORL1-213ENST00000534754 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
SORL1-213ENST00000534754 PARP4Q9UKK3 1724 aaKnown RBP11.05□□□□□ -0.64
SORL1-213ENST00000534754 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
SORL1-213ENST00000534754 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
SORL1-213ENST00000534754 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
SORL1-213ENST00000534754 ATRNO75882 1429 aa11.05□□□□□ -0.64
SORL1-213ENST00000534754 DLG5Q8TDM6 1919 aa11.05□□□□□ -0.64
SORL1-213ENST00000534754 U2AF1L5P0DN76 240 aaPredicted RBP11.05□□□□□ -0.64
SORL1-213ENST00000534754 U2AF1Q01081 240 aaKnown RBP eCLIP11.05□□□□□ -0.64
SORL1-213ENST00000534754 EIF4A2Q14240 407 aaKnown RBP11.05□□□□□ -0.64
SORL1-213ENST00000534754 ANKRD24Q8TF21 1146 aa11.05□□□□□ -0.64
SORL1-213ENST00000534754 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 NUCB1Q02818 461 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 EXOSC9Q06265 439 aaKnown RBP11.04□□□□□ -0.64
SORL1-213ENST00000534754 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 USP21Q9UK80 565 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 THSD7AQ9UPZ6 1657 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 CRB1P82279 1406 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 LRRC37A3O60309 1634 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
SORL1-213ENST00000534754 TSR2Q969E8 191 aaKnown RBP11.04□□□□□ -0.64
SORL1-213ENST00000534754 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
SORL1-213ENST00000534754 GOLGA6L22H0YM25 854 aa11.03□□□□□ -0.64
SORL1-213ENST00000534754 IL13P35225 146 aa11.03□□□□□ -0.64
SORL1-213ENST00000534754 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
SORL1-213ENST00000534754 BMP2KLQ5H9B9 411 aa11.03□□□□□ -0.64
SORL1-213ENST00000534754 KIF16BQ96L93 1317 aa11.02□□□□□ -0.64
SORL1-213ENST00000534754 IBTKQ9P2D0 1353 aaPredicted RBP11.02□□□□□ -0.65
SORL1-213ENST00000534754 IPO8O15397 1037 aaKnown RBP11.02□□□□□ -0.65
SORL1-213ENST00000534754 NASPP49321 788 aaPredicted RBP11.02□□□□□ -0.65
SORL1-213ENST00000534754 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 TMEM57Q8N5G2 664 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 LNPKQ9C0E8 428 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.65
SORL1-213ENST00000534754 NOB1Q9ULX3 412 aaKnown RBP11.02□□□□□ -0.65
SORL1-213ENST00000534754 K7ELQ4 463 aaPredicted RBP11.01□□□□□ -0.65
SORL1-213ENST00000534754 CHD1LQ86WJ1 897 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 EYA1Q99502 592 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 IL16Q14005 1332 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 SPATA31A5Q5VU36 1347 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 SPATA31A7Q8IWB4 1347 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 MEGF6O75095 1541 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 DIAPH1O60610 1272 aaKnown RBP11.01□□□□□ -0.65
SORL1-213ENST00000534754 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 EVA1CP58658 441 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 KIF2CQ99661 725 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 SPATA31A1Q5TZJ5 1347 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
SORL1-213ENST00000534754 VPS72Q15906 364 aa11□□□□□ -0.65
SORL1-213ENST00000534754 TOM1L2Q6ZVM7 507 aa11□□□□□ -0.65
SORL1-213ENST00000534754 AEBP1Q8IUX7 1158 aa11□□□□□ -0.65
SORL1-213ENST00000534754 KAT6BQ8WYB5 2073 aa11□□□□□ -0.65
SORL1-213ENST00000534754 DISP2A7MBM2 1401 aa11□□□□□ -0.65
SORL1-213ENST00000534754 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
SORL1-213ENST00000534754 KLHL40Q2TBA0 621 aa11□□□□□ -0.65
SORL1-213ENST00000534754 POTEAQ6S8J7 498 aa11□□□□□ -0.65
SORL1-213ENST00000534754 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
SORL1-213ENST00000534754 EP400Q96L91 3159 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 KDRP35968 1356 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 OFD1O75665 1012 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 MSNP26038 577 aaKnown RBP10.99□□□□□ -0.65
SORL1-213ENST00000534754 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
SORL1-213ENST00000534754 TERF1P54274 439 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 CARD10Q9BWT7 1032 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
SORL1-213ENST00000534754 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 TRPC5Q9UL62 973 aaPredicted RBP10.99□□□□□ -0.65
SORL1-213ENST00000534754 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
SORL1-213ENST00000534754 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
SORL1-213ENST00000534754 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
SORL1-213ENST00000534754 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
SORL1-213ENST00000534754 SSFA2P28290 1259 aa10.98□□□□□ -0.65
SORL1-213ENST00000534754 ZNF772Q68DY9 489 aaPredicted RBP10.98□□□□□ -0.65
SORL1-213ENST00000534754 GJD4Q96KN9 370 aaPredicted RBP10.98□□□□□ -0.65
SORL1-213ENST00000534754 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
SORL1-213ENST00000534754 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms