RNA–Protein interactions for RNA: ENST00000534603.5

GATD1-216, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 1 (best)

Gene GATD1, Length 863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-216ENST00000534603 CCER2I3L3R5 266 aa21.81■■□□□ 1.08
GATD1-216ENST00000534603 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
GATD1-216ENST00000534603 MCM10Q7L590 875 aa21.81■■□□□ 1.08
GATD1-216ENST00000534603 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
GATD1-216ENST00000534603 MIER1Q8N108 512 aa21.81■■□□□ 1.08
GATD1-216ENST00000534603 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
GATD1-216ENST00000534603 TAF1LQ8IZX4 1826 aa21.8■■□□□ 1.08
GATD1-216ENST00000534603 CEMIPQ8WUJ3 1361 aa21.8■■□□□ 1.08
GATD1-216ENST00000534603 TEFQ10587 303 aa21.8■■□□□ 1.08
GATD1-216ENST00000534603 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
GATD1-216ENST00000534603 SMARCC1Q92922 1105 aaPredicted RBP21.8■■□□□ 1.08
GATD1-216ENST00000534603 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
GATD1-216ENST00000534603 RIPK4P57078 832 aa21.79■■□□□ 1.08
GATD1-216ENST00000534603 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
GATD1-216ENST00000534603 TXNRD1Q16881 649 aa21.79■■□□□ 1.08
GATD1-216ENST00000534603 ASAP1Q9ULH1 1129 aa21.79■■□□□ 1.08
GATD1-216ENST00000534603 C5P01031 1676 aa21.79■■□□□ 1.08
GATD1-216ENST00000534603 ATG3Q9NT62 314 aa21.78■■□□□ 1.08
GATD1-216ENST00000534603 UBR2Q8IWV8 1755 aa21.78■■□□□ 1.08
GATD1-216ENST00000534603 PROM2Q8N271 834 aa21.77■■□□□ 1.08
GATD1-216ENST00000534603 APAF1O14727 1248 aa21.76■■□□□ 1.07
GATD1-216ENST00000534603 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
GATD1-216ENST00000534603 CCNL1Q9UK58 526 aaPredicted RBP21.75■■□□□ 1.07
GATD1-216ENST00000534603 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
GATD1-216ENST00000534603 SLC27A3Q5K4L6 730 aa21.74■■□□□ 1.07
GATD1-216ENST00000534603 THUMPD2Q9BTF0 503 aaKnown RBP21.74■■□□□ 1.07
GATD1-216ENST00000534603 KDM3BQ7LBC6 1761 aa21.74■■□□□ 1.07
GATD1-216ENST00000534603 KCNQ4P56696 695 aa21.73■■□□□ 1.07
GATD1-216ENST00000534603 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
GATD1-216ENST00000534603 SLC39A6Q13433 755 aa21.72■■□□□ 1.07
GATD1-216ENST00000534603 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
GATD1-216ENST00000534603 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
GATD1-216ENST00000534603 COL5A3P25940 1745 aaPredicted RBP21.72■■□□□ 1.07
GATD1-216ENST00000534603 TJP1Q07157 1748 aa21.72■■□□□ 1.07
GATD1-216ENST00000534603 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
GATD1-216ENST00000534603 KCPQ6ZWJ8 1503 aa21.71■■□□□ 1.07
GATD1-216ENST00000534603 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
GATD1-216ENST00000534603 SIK1P57059 783 aa21.71■■□□□ 1.07
GATD1-216ENST00000534603 CICQ96RK0 1608 aaPredicted RBP21.7■■□□□ 1.06
GATD1-216ENST00000534603 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
GATD1-216ENST00000534603 BTBD11A6QL63 1104 aa21.7■■□□□ 1.06
GATD1-216ENST00000534603 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
GATD1-216ENST00000534603 TTC5Q8N0Z6 440 aa21.7■■□□□ 1.06
GATD1-216ENST00000534603 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
GATD1-216ENST00000534603 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
GATD1-216ENST00000534603 ATP6V1AP38606 617 aa21.68■■□□□ 1.06
GATD1-216ENST00000534603 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
GATD1-216ENST00000534603 QSER1Q2KHR3 1735 aa21.67■■□□□ 1.06
GATD1-216ENST00000534603 ZNF790Q6PG37 636 aa21.67■■□□□ 1.06
GATD1-216ENST00000534603 ANO8Q9HCE9 1232 aaPredicted RBP21.67■■□□□ 1.06
GATD1-216ENST00000534603 STK32BQ9NY57 414 aa21.66■■□□□ 1.06
GATD1-216ENST00000534603 ITPK1Q13572 414 aa21.65■■□□□ 1.06
GATD1-216ENST00000534603 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
GATD1-216ENST00000534603 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
GATD1-216ENST00000534603 UBR3Q6ZT12 1888 aa21.64■■□□□ 1.06
GATD1-216ENST00000534603 KCNQ3O43525 872 aa21.64■■□□□ 1.05
GATD1-216ENST00000534603 MYH14Q7Z406 1995 aaKnown RBP21.64■■□□□ 1.05
GATD1-216ENST00000534603 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.05
GATD1-216ENST00000534603 PSDA5PKW4 1024 aaPredicted RBP21.63■■□□□ 1.05
GATD1-216ENST00000534603 HMGB2P26583 209 aaKnown RBP21.63■■□□□ 1.05
GATD1-216ENST00000534603 R3HDM1Q15032 1099 aaKnown RBP21.63■■□□□ 1.05
GATD1-216ENST00000534603 ZNF827Q17R98 1081 aa21.63■■□□□ 1.05
GATD1-216ENST00000534603 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
GATD1-216ENST00000534603 ZNF496Q96IT1 587 aaPredicted RBP21.63■■□□□ 1.05
GATD1-216ENST00000534603 SALL2Q9Y467 1007 aaPredicted RBP21.63■■□□□ 1.05
GATD1-216ENST00000534603 FMNL2Q96PY5 1086 aa21.62■■□□□ 1.05
GATD1-216ENST00000534603 TSPYL4Q9UJ04 414 aa21.62■■□□□ 1.05
GATD1-216ENST00000534603 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
GATD1-216ENST00000534603 HEG1Q9ULI3 1381 aa21.61■■□□□ 1.05
GATD1-216ENST00000534603 CALD1Q05682 793 aaKnown RBP21.61■■□□□ 1.05
GATD1-216ENST00000534603 SLC15A2Q16348 729 aa21.61■■□□□ 1.05
GATD1-216ENST00000534603 CCDC27Q2M243 656 aa21.61■■□□□ 1.05
GATD1-216ENST00000534603 DNAJC10Q8IXB1 793 aa21.6■■□□□ 1.05
GATD1-216ENST00000534603 AKT1S1Q96B36 256 aa21.6■■□□□ 1.05
GATD1-216ENST00000534603 AK7Q96M32 723 aa21.6■■□□□ 1.05
GATD1-216ENST00000534603 CASZ1Q86V15 1759 aa21.6■■□□□ 1.05
GATD1-216ENST00000534603 WWC1Q8IX03 1113 aa21.59■■□□□ 1.05
GATD1-216ENST00000534603 VSIG10Q8N0Z9 540 aa21.59■■□□□ 1.05
GATD1-216ENST00000534603 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
GATD1-216ENST00000534603 BABAM1Q9NWV8 329 aa21.58■■□□□ 1.05
GATD1-216ENST00000534603 TFCP2L1Q9NZI6 479 aa21.58■■□□□ 1.05
GATD1-216ENST00000534603 CNTNAP4Q9C0A0 1308 aa21.56■■□□□ 1.04
GATD1-216ENST00000534603 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
GATD1-216ENST00000534603 CHL1O00533 1208 aa21.55■■□□□ 1.04
GATD1-216ENST00000534603 GNPATO15228 680 aa21.55■■□□□ 1.04
GATD1-216ENST00000534603 EIF4A1P60842 406 aaKnown RBP21.55■■□□□ 1.04
GATD1-216ENST00000534603 CFAP44Q96MT7 982 aa21.55■■□□□ 1.04
GATD1-216ENST00000534603 IFT57Q9NWB7 429 aa21.55■■□□□ 1.04
GATD1-216ENST00000534603 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
GATD1-216ENST00000534603 CRKLP46109 303 aaKnown RBP21.54■■□□□ 1.04
GATD1-216ENST00000534603 GNAI1P63096 354 aa21.54■■□□□ 1.04
GATD1-216ENST00000534603 SNRPA1P09661 255 aaKnown RBP21.53■■□□□ 1.04
GATD1-216ENST00000534603 CYP19A1P11511 503 aaPredicted RBP21.53■■□□□ 1.04
GATD1-216ENST00000534603 TEX13AQ9BXU3 409 aaPredicted RBP21.53■■□□□ 1.04
GATD1-216ENST00000534603 MBIPQ9NS73 344 aa21.53■■□□□ 1.04
GATD1-216ENST00000534603 PNPLA7Q6ZV29 1317 aa21.53■■□□□ 1.04
GATD1-216ENST00000534603 PRAMEF22A3QJZ6 481 aa21.52■■□□□ 1.04
GATD1-216ENST00000534603 PHF14O94880 888 aa21.52■■□□□ 1.04
GATD1-216ENST00000534603 STARD3NLO95772 234 aa21.52■■□□□ 1.04
GATD1-216ENST00000534603 RC3H1Q5TC82 1133 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms