RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 RTEL1-TNFRSF6BF6WH68 1400 aa12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 CPLX2Q6PUV4 134 aaKnown RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 C9orf78Q9NZ63 289 aaPredicted RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 SURF6O75683 361 aaKnown RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 GNAI3P08754 354 aa12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 UBTFL1P0CB47 393 aaPredicted RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
NCAPD3-214ENST00000534548 NEMFO60524 1076 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 CDR1P51861 262 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 STK3Q13188 491 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 FERMT3Q86UX7 667 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 ZSCAN31Q96LW9 406 aaPredicted RBP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 ATP7AQ04656 1500 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 GNAI2P04899 355 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 ME1P48163 572 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 LMAN1P49257 510 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 NUCB1Q02818 461 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 THUMPD2Q9BTF0 503 aaKnown RBP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 ZCCHC11Q5TAX3 1644 aaKnown RBP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
NCAPD3-214ENST00000534548 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 RPAP2Q8IXW5 612 aaPredicted RBP12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 EIF2S2P20042 333 aaKnown RBP12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 DMTNQ08495 405 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 UBE2HP62256 183 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 STK38Q15208 465 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 V9GYY5 206 aaPredicted RBP12.06□□□□□ -0.48
NCAPD3-214ENST00000534548 ZNF500O60304 480 aaPredicted RBP12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 ZNF445P59923 1031 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 G3BP1Q13283 466 aaKnown RBP eCLIP12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 ZNF397Q8NF99 534 aaPredicted RBP12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 CBFA2T2O43439 604 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 AMPHP49418 695 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 IPO4Q8TEX9 1081 aaKnown RBP12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 RNF17Q9BXT8 1623 aaKnown RBP12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 IDI1Q13907 227 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 USP48Q86UV5 1035 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 CFAP45Q9UL16 551 aa12.05□□□□□ -0.48
NCAPD3-214ENST00000534548 SNW1Q13573 536 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 CCDC191Q8NCU4 936 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 TSC1Q92574 1164 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 GAS2L3Q86XJ1 694 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 SMTNL1A8MU46 457 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 MX1P20591 662 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 FAM193AP78312 1265 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 MLECQ14165 292 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 FSD1Q9BTV5 496 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 SRCIN1Q9C0H9 1055 aa12.04□□□□□ -0.48
NCAPD3-214ENST00000534548 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 UTP14CQ5TAP6 766 aaKnown RBP12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 C17orf53Q8N3J3 647 aaPredicted RBP12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 CENPHQ9H3R5 247 aa12.03□□□□□ -0.48
NCAPD3-214ENST00000534548 ZSCAN12O43309 604 aa12.02□□□□□ -0.48
NCAPD3-214ENST00000534548 STX6O43752 255 aa12.02□□□□□ -0.48
NCAPD3-214ENST00000534548 SLC4A2P04920 1241 aa12.02□□□□□ -0.48
NCAPD3-214ENST00000534548 ZNF165P49910 485 aa12.02□□□□□ -0.48
NCAPD3-214ENST00000534548 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
NCAPD3-214ENST00000534548 CASQ1P31415 396 aa12.02□□□□□ -0.49
NCAPD3-214ENST00000534548 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
NCAPD3-214ENST00000534548 GBP3Q9H0R5 595 aa12.02□□□□□ -0.49
NCAPD3-214ENST00000534548 LTV1Q96GA3 475 aaPredicted RBP12.02□□□□□ -0.49
NCAPD3-214ENST00000534548 ANO10Q9NW15 660 aa12.02□□□□□ -0.49
NCAPD3-214ENST00000534548 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms