RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.51
NCAM1-218ENST00000534516 NPC1L1Q9UHC9 1359 aa11.83□□□□□ -0.52
NCAM1-218ENST00000534516 PHKG2P15735 406 aa11.83□□□□□ -0.52
NCAM1-218ENST00000534516 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
NCAM1-218ENST00000534516 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
NCAM1-218ENST00000534516 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
NCAM1-218ENST00000534516 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
NCAM1-218ENST00000534516 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
NCAM1-218ENST00000534516 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
NCAM1-218ENST00000534516 HMOX1P09601 288 aa11.81□□□□□ -0.52
NCAM1-218ENST00000534516 SLC15A2Q16348 729 aa11.81□□□□□ -0.52
NCAM1-218ENST00000534516 PIGBQ92521 554 aa11.81□□□□□ -0.52
NCAM1-218ENST00000534516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
NCAM1-218ENST00000534516 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
NCAM1-218ENST00000534516 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
NCAM1-218ENST00000534516 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
NCAM1-218ENST00000534516 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
NCAM1-218ENST00000534516 KDRP35968 1356 aa11.79□□□□□ -0.52
NCAM1-218ENST00000534516 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
NCAM1-218ENST00000534516 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
NCAM1-218ENST00000534516 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
NCAM1-218ENST00000534516 C5P01031 1676 aa11.78□□□□□ -0.52
NCAM1-218ENST00000534516 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
NCAM1-218ENST00000534516 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
NCAM1-218ENST00000534516 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
NCAM1-218ENST00000534516 ZNF530Q6P9A1 599 aaPredicted RBP11.78□□□□□ -0.52
NCAM1-218ENST00000534516 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
NCAM1-218ENST00000534516 CCNL1Q9UK58 526 aaPredicted RBP11.78□□□□□ -0.52
NCAM1-218ENST00000534516 PALLDQ8WX93 1383 aa11.78□□□□□ -0.52
NCAM1-218ENST00000534516 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
NCAM1-218ENST00000534516 ASAP1Q9ULH1 1129 aa11.77□□□□□ -0.53
NCAM1-218ENST00000534516 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
NCAM1-218ENST00000534516 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.53
NCAM1-218ENST00000534516 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
NCAM1-218ENST00000534516 MIER1Q8N108 512 aa11.76□□□□□ -0.53
NCAM1-218ENST00000534516 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
NCAM1-218ENST00000534516 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
NCAM1-218ENST00000534516 U2SURPO15042 1029 aaKnown RBP11.75□□□□□ -0.53
NCAM1-218ENST00000534516 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
NCAM1-218ENST00000534516 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
NCAM1-218ENST00000534516 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
NCAM1-218ENST00000534516 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
NCAM1-218ENST00000534516 PNPLA7Q6ZV29 1317 aa11.75□□□□□ -0.53
NCAM1-218ENST00000534516 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 PTGER2P43116 358 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 ITPK1Q13572 414 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 SLC4A9Q96Q91 983 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 PLEKHG2Q9H7P9 1386 aa11.74□□□□□ -0.53
NCAM1-218ENST00000534516 ERVV-2B6SEH9 535 aa11.73□□□□□ -0.53
NCAM1-218ENST00000534516 CLCN6P51797 869 aa11.73□□□□□ -0.53
NCAM1-218ENST00000534516 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
NCAM1-218ENST00000534516 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
NCAM1-218ENST00000534516 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
NCAM1-218ENST00000534516 UBR3Q6ZT12 1888 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 SIK1P57059 783 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 CABP4P57796 275 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 COL23A1Q86Y22 540 aaPredicted RBP11.72□□□□□ -0.53
NCAM1-218ENST00000534516 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 SMARCC1Q92922 1105 aaPredicted RBP11.72□□□□□ -0.53
NCAM1-218ENST00000534516 PHACTR3Q96KR7 559 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
NCAM1-218ENST00000534516 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
NCAM1-218ENST00000534516 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
NCAM1-218ENST00000534516 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
NCAM1-218ENST00000534516 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
NCAM1-218ENST00000534516 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
NCAM1-218ENST00000534516 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
NCAM1-218ENST00000534516 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
NCAM1-218ENST00000534516 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
NCAM1-218ENST00000534516 MTFR1LQ9H019 292 aa11.7□□□□□ -0.54
NCAM1-218ENST00000534516 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
NCAM1-218ENST00000534516 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
NCAM1-218ENST00000534516 TJP1Q07157 1748 aa11.69□□□□□ -0.54
NCAM1-218ENST00000534516 U2AF1L5P0DN76 240 aaPredicted RBP11.69□□□□□ -0.54
NCAM1-218ENST00000534516 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
NCAM1-218ENST00000534516 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.54
NCAM1-218ENST00000534516 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
NCAM1-218ENST00000534516 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
NCAM1-218ENST00000534516 PHF14O94880 888 aa11.68□□□□□ -0.54
NCAM1-218ENST00000534516 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
NCAM1-218ENST00000534516 MSL1Q68DK7 614 aa11.68□□□□□ -0.54
NCAM1-218ENST00000534516 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
NCAM1-218ENST00000534516 SIPA1L3O60292 1781 aaPredicted RBP11.68□□□□□ -0.54
NCAM1-218ENST00000534516 MRC1P22897 1456 aa11.68□□□□□ -0.54
NCAM1-218ENST00000534516 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
NCAM1-218ENST00000534516 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
NCAM1-218ENST00000534516 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
NCAM1-218ENST00000534516 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
NCAM1-218ENST00000534516 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
NCAM1-218ENST00000534516 AK7Q96M32 723 aa11.66□□□□□ -0.54
NCAM1-218ENST00000534516 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
NCAM1-218ENST00000534516 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
NCAM1-218ENST00000534516 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.54
NCAM1-218ENST00000534516 UBR2Q8IWV8 1755 aa11.65□□□□□ -0.54
NCAM1-218ENST00000534516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.65□□□□□ -0.54
NCAM1-218ENST00000534516 GNPATO15228 680 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms