RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
LINC00958-207ENST00000534477 USP54Q70EL1 1684 aa11.2□□□□□ -0.62
LINC00958-207ENST00000534477 BCL9O00512 1426 aa11.2□□□□□ -0.62
LINC00958-207ENST00000534477 KCNQ4P56696 695 aa11.2□□□□□ -0.62
LINC00958-207ENST00000534477 IP6K1Q92551 441 aa11.2□□□□□ -0.62
LINC00958-207ENST00000534477 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
LINC00958-207ENST00000534477 MAP3K19Q56UN5 1328 aa11.19□□□□□ -0.62
LINC00958-207ENST00000534477 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
LINC00958-207ENST00000534477 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
LINC00958-207ENST00000534477 RRS1Q15050 365 aaKnown RBP11.19□□□□□ -0.62
LINC00958-207ENST00000534477 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
LINC00958-207ENST00000534477 USHBP1Q8N6Y0 703 aa11.19□□□□□ -0.62
LINC00958-207ENST00000534477 GGNBP2Q9H3C7 697 aa11.19□□□□□ -0.62
LINC00958-207ENST00000534477 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
LINC00958-207ENST00000534477 HOXC9P31274 260 aa11.18□□□□□ -0.62
LINC00958-207ENST00000534477 PTGER2P43116 358 aa11.18□□□□□ -0.62
LINC00958-207ENST00000534477 ZNF827Q17R98 1081 aa11.18□□□□□ -0.62
LINC00958-207ENST00000534477 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
LINC00958-207ENST00000534477 TESK2Q96S53 571 aa11.18□□□□□ -0.62
LINC00958-207ENST00000534477 MTFR1LQ9H019 292 aa11.18□□□□□ -0.62
LINC00958-207ENST00000534477 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
LINC00958-207ENST00000534477 PDE4AP27815 886 aa11.17□□□□□ -0.62
LINC00958-207ENST00000534477 PRIM1P49642 420 aaKnown RBP11.17□□□□□ -0.62
LINC00958-207ENST00000534477 TMF1P82094 1093 aa11.17□□□□□ -0.62
LINC00958-207ENST00000534477 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
LINC00958-207ENST00000534477 IER5LQ5T953 404 aa11.17□□□□□ -0.62
LINC00958-207ENST00000534477 POLR3GLQ9BT43 218 aa11.17□□□□□ -0.62
LINC00958-207ENST00000534477 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
LINC00958-207ENST00000534477 DOT1LQ8TEK3 1739 aa11.16□□□□□ -0.62
LINC00958-207ENST00000534477 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
LINC00958-207ENST00000534477 ARXQ96QS3 562 aa11.16□□□□□ -0.62
LINC00958-207ENST00000534477 SYT17Q9BSW7 474 aa11.16□□□□□ -0.62
LINC00958-207ENST00000534477 LRRC4BQ9NT99 713 aa11.16□□□□□ -0.62
LINC00958-207ENST00000534477 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
LINC00958-207ENST00000534477 USP47Q96K76 1375 aa11.16□□□□□ -0.62
LINC00958-207ENST00000534477 E2F4Q16254 413 aa11.15□□□□□ -0.62
LINC00958-207ENST00000534477 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
LINC00958-207ENST00000534477 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
LINC00958-207ENST00000534477 TFCP2L1Q9NZI6 479 aa11.15□□□□□ -0.62
LINC00958-207ENST00000534477 MEGF6O75095 1541 aa11.14□□□□□ -0.63
LINC00958-207ENST00000534477 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
LINC00958-207ENST00000534477 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
LINC00958-207ENST00000534477 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
LINC00958-207ENST00000534477 DDX27Q96GQ7 796 aaKnown RBP11.14□□□□□ -0.63
LINC00958-207ENST00000534477 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
LINC00958-207ENST00000534477 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
LINC00958-207ENST00000534477 POLD1P28340 1107 aa11.13□□□□□ -0.63
LINC00958-207ENST00000534477 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
LINC00958-207ENST00000534477 MFSD10Q14728 455 aa11.13□□□□□ -0.63
LINC00958-207ENST00000534477 NBPF6Q5VWK0 638 aa11.13□□□□□ -0.63
LINC00958-207ENST00000534477 NBPF4Q96M43 638 aa11.13□□□□□ -0.63
LINC00958-207ENST00000534477 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
LINC00958-207ENST00000534477 KIF20BQ96Q89 1820 aa11.12□□□□□ -0.63
LINC00958-207ENST00000534477 FYB1O15117 783 aa11.12□□□□□ -0.63
LINC00958-207ENST00000534477 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
LINC00958-207ENST00000534477 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
LINC00958-207ENST00000534477 GPR162Q16538 588 aa11.12□□□□□ -0.63
LINC00958-207ENST00000534477 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
LINC00958-207ENST00000534477 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
LINC00958-207ENST00000534477 PNPLA7Q6ZV29 1317 aa11.11□□□□□ -0.63
LINC00958-207ENST00000534477 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
LINC00958-207ENST00000534477 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
LINC00958-207ENST00000534477 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
LINC00958-207ENST00000534477 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
LINC00958-207ENST00000534477 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
LINC00958-207ENST00000534477 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
LINC00958-207ENST00000534477 RTL1A6NKG5 1358 aa11.11□□□□□ -0.63
LINC00958-207ENST00000534477 SHANK3Q9BYB0 1731 aa11.1□□□□□ -0.63
LINC00958-207ENST00000534477 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
LINC00958-207ENST00000534477 G3V3G9 751 aa11.1□□□□□ -0.63
LINC00958-207ENST00000534477 PLCG2P16885 1265 aa11.1□□□□□ -0.63
LINC00958-207ENST00000534477 CDCA8Q53HL2 280 aa11.1□□□□□ -0.63
LINC00958-207ENST00000534477 MPRIPQ6WCQ1 1025 aa11.1□□□□□ -0.63
LINC00958-207ENST00000534477 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
LINC00958-207ENST00000534477 NSD2O96028 1365 aa11.09□□□□□ -0.63
LINC00958-207ENST00000534477 MICALL2Q8IY33 904 aa11.09□□□□□ -0.63
LINC00958-207ENST00000534477 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
LINC00958-207ENST00000534477 EMILIN1Q9Y6C2 1016 aa11.09□□□□□ -0.63
LINC00958-207ENST00000534477 TNNT2P45379 298 aaPredicted RBP11.08□□□□□ -0.64
LINC00958-207ENST00000534477 DPY19L2Q6NUT2 758 aa11.08□□□□□ -0.64
LINC00958-207ENST00000534477 PCDH11XQ9BZA7 1347 aa11.08□□□□□ -0.64
LINC00958-207ENST00000534477 PCDH11YQ9BZA8 1340 aa11.08□□□□□ -0.64
LINC00958-207ENST00000534477 LY75O60449 1722 aa11.07□□□□□ -0.64
LINC00958-207ENST00000534477 FLT4P35916 1363 aa11.07□□□□□ -0.64
LINC00958-207ENST00000534477 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
LINC00958-207ENST00000534477 SLC16A10Q8TF71 515 aa11.07□□□□□ -0.64
LINC00958-207ENST00000534477 INSRP06213 1382 aa11.06□□□□□ -0.64
LINC00958-207ENST00000534477 PHF14O94880 888 aa11.06□□□□□ -0.64
LINC00958-207ENST00000534477 COL23A1Q86Y22 540 aaPredicted RBP11.06□□□□□ -0.64
LINC00958-207ENST00000534477 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
LINC00958-207ENST00000534477 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
LINC00958-207ENST00000534477 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
LINC00958-207ENST00000534477 CGNL1Q0VF96 1302 aa11.06□□□□□ -0.64
LINC00958-207ENST00000534477 CHD4Q14839 1912 aa11.05□□□□□ -0.64
LINC00958-207ENST00000534477 PALLDQ8WX93 1383 aa11.05□□□□□ -0.64
LINC00958-207ENST00000534477 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
LINC00958-207ENST00000534477 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
LINC00958-207ENST00000534477 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
LINC00958-207ENST00000534477 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
LINC00958-207ENST00000534477 CYP27B1O15528 508 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms