RNA–Protein interactions for RNA: ENST00000534466.1

PDE4DIP-235, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 4

Gene PDE4DIP, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-235ENST00000534466 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
PDE4DIP-235ENST00000534466 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
PDE4DIP-235ENST00000534466 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
PDE4DIP-235ENST00000534466 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
PDE4DIP-235ENST00000534466 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
PDE4DIP-235ENST00000534466 MRC1P22897 1456 aa17.37■□□□□ 0.37
PDE4DIP-235ENST00000534466 TEFQ10587 303 aa17.37■□□□□ 0.37
PDE4DIP-235ENST00000534466 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
PDE4DIP-235ENST00000534466 CCNL1Q9UK58 526 aaPredicted RBP17.37■□□□□ 0.37
PDE4DIP-235ENST00000534466 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
PDE4DIP-235ENST00000534466 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
PDE4DIP-235ENST00000534466 PSDA5PKW4 1024 aaPredicted RBP17.36■□□□□ 0.37
PDE4DIP-235ENST00000534466 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
PDE4DIP-235ENST00000534466 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
PDE4DIP-235ENST00000534466 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 RIPK4P57078 832 aa17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 R3HDM1Q15032 1099 aaKnown RBP17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 NBPF14Q5TI25 921 aa17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
PDE4DIP-235ENST00000534466 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
PDE4DIP-235ENST00000534466 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
PDE4DIP-235ENST00000534466 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
PDE4DIP-235ENST00000534466 C5P01031 1676 aa17.33■□□□□ 0.37
PDE4DIP-235ENST00000534466 PAPPAQ13219 1627 aa17.33■□□□□ 0.37
PDE4DIP-235ENST00000534466 LOC102724428A0A0B4J2F2 783 aa17.33■□□□□ 0.36
PDE4DIP-235ENST00000534466 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.36
PDE4DIP-235ENST00000534466 SIK1P57059 783 aa17.33■□□□□ 0.36
PDE4DIP-235ENST00000534466 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
PDE4DIP-235ENST00000534466 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
PDE4DIP-235ENST00000534466 APAF1O14727 1248 aa17.32■□□□□ 0.36
PDE4DIP-235ENST00000534466 ATP6V1AP38606 617 aa17.32■□□□□ 0.36
PDE4DIP-235ENST00000534466 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
PDE4DIP-235ENST00000534466 SLC4A9Q96Q91 983 aa17.31■□□□□ 0.36
PDE4DIP-235ENST00000534466 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
PDE4DIP-235ENST00000534466 SLC15A2Q16348 729 aa17.3■□□□□ 0.36
PDE4DIP-235ENST00000534466 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
PDE4DIP-235ENST00000534466 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
PDE4DIP-235ENST00000534466 ITPK1Q13572 414 aa17.29■□□□□ 0.36
PDE4DIP-235ENST00000534466 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
PDE4DIP-235ENST00000534466 MIER1Q8N108 512 aa17.29■□□□□ 0.36
PDE4DIP-235ENST00000534466 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
PDE4DIP-235ENST00000534466 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 KCNQ3O43525 872 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 LMOD3Q0VAK6 560 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
PDE4DIP-235ENST00000534466 TJP1Q07157 1748 aa17.27■□□□□ 0.36
PDE4DIP-235ENST00000534466 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
PDE4DIP-235ENST00000534466 ZNF790Q6PG37 636 aa17.27■□□□□ 0.36
PDE4DIP-235ENST00000534466 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
PDE4DIP-235ENST00000534466 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.35
PDE4DIP-235ENST00000534466 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
PDE4DIP-235ENST00000534466 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
PDE4DIP-235ENST00000534466 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
PDE4DIP-235ENST00000534466 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
PDE4DIP-235ENST00000534466 AK7Q96M32 723 aa17.25■□□□□ 0.35
PDE4DIP-235ENST00000534466 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
PDE4DIP-235ENST00000534466 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
PDE4DIP-235ENST00000534466 MYH14Q7Z406 1995 aaKnown RBP17.24■□□□□ 0.35
PDE4DIP-235ENST00000534466 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
PDE4DIP-235ENST00000534466 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
PDE4DIP-235ENST00000534466 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
PDE4DIP-235ENST00000534466 SALL2Q9Y467 1007 aaPredicted RBP17.23■□□□□ 0.35
PDE4DIP-235ENST00000534466 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
PDE4DIP-235ENST00000534466 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
PDE4DIP-235ENST00000534466 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
PDE4DIP-235ENST00000534466 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
PDE4DIP-235ENST00000534466 HEG1Q9ULI3 1381 aa17.22■□□□□ 0.35
PDE4DIP-235ENST00000534466 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.35
PDE4DIP-235ENST00000534466 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
PDE4DIP-235ENST00000534466 PHF14O94880 888 aa17.21■□□□□ 0.35
PDE4DIP-235ENST00000534466 HMGB2P26583 209 aaKnown RBP17.21■□□□□ 0.35
PDE4DIP-235ENST00000534466 AMIGO3Q86WK7 504 aa17.21■□□□□ 0.35
PDE4DIP-235ENST00000534466 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
PDE4DIP-235ENST00000534466 GNPATO15228 680 aa17.2■□□□□ 0.34
PDE4DIP-235ENST00000534466 MSH5O43196 834 aa17.2■□□□□ 0.34
PDE4DIP-235ENST00000534466 CRKLP46109 303 aaKnown RBP17.2■□□□□ 0.34
PDE4DIP-235ENST00000534466 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
PDE4DIP-235ENST00000534466 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
PDE4DIP-235ENST00000534466 CNTNAP4Q9C0A0 1308 aa17.19■□□□□ 0.34
PDE4DIP-235ENST00000534466 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
PDE4DIP-235ENST00000534466 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
PDE4DIP-235ENST00000534466 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
PDE4DIP-235ENST00000534466 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
PDE4DIP-235ENST00000534466 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
PDE4DIP-235ENST00000534466 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
PDE4DIP-235ENST00000534466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 ZBTB1Q9Y2K1 713 aa17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
PDE4DIP-235ENST00000534466 CHL1O00533 1208 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms