RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 SIX5Q8N196 739 aa7.02□□□□□ -1.29
HIPK3-206ENST00000534262 NLRP3Q96P20 1036 aa7.02□□□□□ -1.29
HIPK3-206ENST00000534262 FHDC1Q9C0D6 1143 aaPredicted RBP7.02□□□□□ -1.29
HIPK3-206ENST00000534262 POLMQ9NP87 494 aaPredicted RBP7.02□□□□□ -1.29
HIPK3-206ENST00000534262 FAM196BA6NMK8 535 aa7.01□□□□□ -1.29
HIPK3-206ENST00000534262 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
HIPK3-206ENST00000534262 CDCA8Q53HL2 280 aa7.01□□□□□ -1.29
HIPK3-206ENST00000534262 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
HIPK3-206ENST00000534262 TPCN2Q8NHX9 752 aa7.01□□□□□ -1.29
HIPK3-206ENST00000534262 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7□□□□□ -1.29
HIPK3-206ENST00000534262 MAN1A2O60476 641 aa7□□□□□ -1.29
HIPK3-206ENST00000534262 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
HIPK3-206ENST00000534262 LARP1Q6PKG0 1096 aaKnown RBP7□□□□□ -1.29
HIPK3-206ENST00000534262 ZNF358Q9NW07 568 aa7□□□□□ -1.29
HIPK3-206ENST00000534262 SMTNP53814 917 aa6.99□□□□□ -1.29
HIPK3-206ENST00000534262 PSME1Q06323 249 aa6.99□□□□□ -1.29
HIPK3-206ENST00000534262 MTFR1Q15390 333 aa6.99□□□□□ -1.29
HIPK3-206ENST00000534262 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.99□□□□□ -1.29
HIPK3-206ENST00000534262 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
HIPK3-206ENST00000534262 PBXIP1Q96AQ6 731 aa6.99□□□□□ -1.29
HIPK3-206ENST00000534262 ZNF594Q96JF6 807 aaPredicted RBP6.99□□□□□ -1.29
HIPK3-206ENST00000534262 SPATA31C2B4DYI2 1134 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L10C9JJH3 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L21D6R901 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 M0R2N6 131 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 BACH1O14867 736 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 ATG7O95352 703 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 EPHA4P54764 986 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 USP17L24Q0WX57 530 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 PRICKLE2Q7Z3G6 844 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 PPARGC1BQ86YN6 1023 aaKnown RBP6.98□□□□□ -1.29
HIPK3-206ENST00000534262 ANKMY2Q8IV38 441 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 ZSCAN10Q96SZ4 725 aaPredicted RBP6.98□□□□□ -1.29
HIPK3-206ENST00000534262 TRAIPQ9BWF2 469 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 SERTAD1Q9UHV2 236 aa6.98□□□□□ -1.29
HIPK3-206ENST00000534262 A6NJY4 79 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 SFI1A8K8P3 1242 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 CDK2AP1O14519 115 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 SEC13P55735 322 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 POU4F2Q12837 409 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 DPYDQ12882 1025 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 ELOAQ14241 798 aaKnown RBP6.97□□□□□ -1.29
HIPK3-206ENST00000534262 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 ZNF295-AS1Q8N0V1 137 aa6.97□□□□□ -1.29
HIPK3-206ENST00000534262 IQSEC3Q9UPP2 1182 aaPredicted RBP6.97□□□□□ -1.29
HIPK3-206ENST00000534262 SLC35F4A4IF30 521 aa6.96□□□□□ -1.3
HIPK3-206ENST00000534262 PPP1R15AO75807 674 aaPredicted RBP6.96□□□□□ -1.3
HIPK3-206ENST00000534262 FOXK2Q01167 660 aa6.96□□□□□ -1.3
HIPK3-206ENST00000534262 PTSQ03393 145 aa6.96□□□□□ -1.3
HIPK3-206ENST00000534262 TLR1Q15399 786 aa6.96□□□□□ -1.3
HIPK3-206ENST00000534262 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
HIPK3-206ENST00000534262 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
HIPK3-206ENST00000534262 SENP3-EIF4A1A0A087X0R7 540 aa6.95□□□□□ -1.3
HIPK3-206ENST00000534262 ZBTB7CA1YPR0 619 aa6.95□□□□□ -1.3
HIPK3-206ENST00000534262 NBPF10Q6P3W6 841 aaKnown RBP6.95□□□□□ -1.3
HIPK3-206ENST00000534262 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
HIPK3-206ENST00000534262 NBPF15Q8N660 670 aa6.95□□□□□ -1.3
HIPK3-206ENST00000534262 USP3Q9Y6I4 520 aa6.95□□□□□ -1.3
HIPK3-206ENST00000534262 RHOQP17081 205 aa6.94□□□□□ -1.3
HIPK3-206ENST00000534262 TMEM214Q6NUQ4 689 aaKnown RBP6.94□□□□□ -1.3
HIPK3-206ENST00000534262 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
HIPK3-206ENST00000534262 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
HIPK3-206ENST00000534262 FAM200AQ8TCP9 573 aa6.94□□□□□ -1.3
HIPK3-206ENST00000534262 RHBDD1Q8TEB9 315 aa6.94□□□□□ -1.3
HIPK3-206ENST00000534262 NXF1Q9UBU9 619 aaKnown RBP6.94□□□□□ -1.3
HIPK3-206ENST00000534262 ZMIZ1Q9ULJ6 1067 aa6.94□□□□□ -1.3
HIPK3-206ENST00000534262 NOVA2Q9UNW9 492 aaKnown RBP6.94□□□□□ -1.3
HIPK3-206ENST00000534262 RBM19Q9Y4C8 960 aaKnown RBP6.94□□□□□ -1.3
HIPK3-206ENST00000534262 FAM69CQ0P6D2 419 aa6.93□□□□□ -1.3
HIPK3-206ENST00000534262 C4orf17Q53FE4 359 aa6.93□□□□□ -1.3
HIPK3-206ENST00000534262 GNASQ5JWF2 1037 aa6.92□□□□□ -1.3
HIPK3-206ENST00000534262 NPAS3Q8IXF0 933 aa6.92□□□□□ -1.3
HIPK3-206ENST00000534262 CCDC155Q8N6L0 562 aa6.92□□□□□ -1.3
HIPK3-206ENST00000534262 ZNF775Q96BV0 537 aaPredicted RBP6.92□□□□□ -1.3
HIPK3-206ENST00000534262 NIFKQ9BYG3 293 aaKnown RBP6.92□□□□□ -1.3
HIPK3-206ENST00000534262 TERTO14746 1132 aaKnown RBP6.91□□□□□ -1.3
HIPK3-206ENST00000534262 C21orf2O43822 256 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 PPFIA3O75145 1194 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 GTF2E1P29083 439 aaPredicted RBP6.91□□□□□ -1.3
HIPK3-206ENST00000534262 TEAD4Q15561 434 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 SLC9A9Q8IVB4 645 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 STK32AQ8WU08 396 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
HIPK3-206ENST00000534262 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 DYRK1BQ9Y463 629 aa6.91□□□□□ -1.3
HIPK3-206ENST00000534262 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
HIPK3-206ENST00000534262 PHKA2P46019 1235 aa6.9□□□□□ -1.3
HIPK3-206ENST00000534262 TMEM164Q5U3C3 297 aa6.9□□□□□ -1.3
HIPK3-206ENST00000534262 GAS2L2Q8NHY3 880 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms