RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
ZNF250-209ENST00000533543 PIGBQ92521 554 aa12.6□□□□□ -0.39
ZNF250-209ENST00000533543 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
ZNF250-209ENST00000533543 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
ZNF250-209ENST00000533543 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
ZNF250-209ENST00000533543 KDRP35968 1356 aa12.58□□□□□ -0.4
ZNF250-209ENST00000533543 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
ZNF250-209ENST00000533543 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
ZNF250-209ENST00000533543 LY75O60449 1722 aa12.57□□□□□ -0.4
ZNF250-209ENST00000533543 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
ZNF250-209ENST00000533543 HMOX1P09601 288 aa12.57□□□□□ -0.4
ZNF250-209ENST00000533543 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
ZNF250-209ENST00000533543 PPP1R1BQ9UD71 204 aaPredicted RBP12.57□□□□□ -0.4
ZNF250-209ENST00000533543 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
ZNF250-209ENST00000533543 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
ZNF250-209ENST00000533543 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
ZNF250-209ENST00000533543 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
ZNF250-209ENST00000533543 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
ZNF250-209ENST00000533543 ITGB4P16144 1822 aa12.55□□□□□ -0.4
ZNF250-209ENST00000533543 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
ZNF250-209ENST00000533543 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
ZNF250-209ENST00000533543 PTGER2P43116 358 aa12.55□□□□□ -0.4
ZNF250-209ENST00000533543 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
ZNF250-209ENST00000533543 DCAF5Q96JK2 942 aa12.55□□□□□ -0.4
ZNF250-209ENST00000533543 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
ZNF250-209ENST00000533543 ERVV-2B6SEH9 535 aa12.54□□□□□ -0.4
ZNF250-209ENST00000533543 ZEB1P37275 1124 aaPredicted RBP12.54□□□□□ -0.4
ZNF250-209ENST00000533543 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
ZNF250-209ENST00000533543 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
ZNF250-209ENST00000533543 SIK1P57059 783 aa12.53□□□□□ -0.4
ZNF250-209ENST00000533543 CABP4P57796 275 aa12.53□□□□□ -0.4
ZNF250-209ENST00000533543 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
ZNF250-209ENST00000533543 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
ZNF250-209ENST00000533543 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
ZNF250-209ENST00000533543 ITPK1Q13572 414 aa12.51□□□□□ -0.41
ZNF250-209ENST00000533543 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
ZNF250-209ENST00000533543 AKAP4Q5JQC9 854 aa12.51□□□□□ -0.41
ZNF250-209ENST00000533543 COL23A1Q86Y22 540 aaPredicted RBP12.51□□□□□ -0.41
ZNF250-209ENST00000533543 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
ZNF250-209ENST00000533543 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
ZNF250-209ENST00000533543 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
ZNF250-209ENST00000533543 ATP6V1AP38606 617 aa12.5□□□□□ -0.41
ZNF250-209ENST00000533543 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
ZNF250-209ENST00000533543 AK7Q96M32 723 aa12.5□□□□□ -0.41
ZNF250-209ENST00000533543 C5P01031 1676 aa12.5□□□□□ -0.41
ZNF250-209ENST00000533543 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
ZNF250-209ENST00000533543 HMGB2P26583 209 aaKnown RBP12.49□□□□□ -0.41
ZNF250-209ENST00000533543 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 NFATC2IPQ8NCF5 419 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 SLC4A9Q96Q91 983 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 ARXQ96QS3 562 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
ZNF250-209ENST00000533543 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
ZNF250-209ENST00000533543 PHF14O94880 888 aa12.48□□□□□ -0.41
ZNF250-209ENST00000533543 MSL1Q68DK7 614 aa12.48□□□□□ -0.41
ZNF250-209ENST00000533543 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
ZNF250-209ENST00000533543 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
ZNF250-209ENST00000533543 C4BP0C0L5 1744 aa12.48□□□□□ -0.41
ZNF250-209ENST00000533543 POLD1P28340 1107 aa12.47□□□□□ -0.41
ZNF250-209ENST00000533543 FLAD1Q8NFF5 587 aa12.47□□□□□ -0.41
ZNF250-209ENST00000533543 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
ZNF250-209ENST00000533543 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
ZNF250-209ENST00000533543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.41
ZNF250-209ENST00000533543 GNPATO15228 680 aa12.46□□□□□ -0.41
ZNF250-209ENST00000533543 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
ZNF250-209ENST00000533543 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.41
ZNF250-209ENST00000533543 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
ZNF250-209ENST00000533543 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.41
ZNF250-209ENST00000533543 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
ZNF250-209ENST00000533543 SYT17Q9BSW7 474 aa12.46□□□□□ -0.41
ZNF250-209ENST00000533543 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
ZNF250-209ENST00000533543 SSFA2P28290 1259 aa12.45□□□□□ -0.42
ZNF250-209ENST00000533543 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
ZNF250-209ENST00000533543 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
ZNF250-209ENST00000533543 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
ZNF250-209ENST00000533543 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
ZNF250-209ENST00000533543 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
ZNF250-209ENST00000533543 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
ZNF250-209ENST00000533543 MRC1P22897 1456 aa12.44□□□□□ -0.42
ZNF250-209ENST00000533543 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
ZNF250-209ENST00000533543 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
ZNF250-209ENST00000533543 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
ZNF250-209ENST00000533543 IL17REQ8NFR9 667 aa12.42□□□□□ -0.42
ZNF250-209ENST00000533543 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
ZNF250-209ENST00000533543 UTRNP46939 3433 aa12.42□□□□□ -0.42
ZNF250-209ENST00000533543 FCHSD2O94868 740 aa12.41□□□□□ -0.42
ZNF250-209ENST00000533543 RALBP1Q15311 655 aa12.41□□□□□ -0.42
ZNF250-209ENST00000533543 COL24A1Q17RW2 1714 aa12.41□□□□□ -0.42
ZNF250-209ENST00000533543 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
ZNF250-209ENST00000533543 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
ZNF250-209ENST00000533543 ADAMTS7Q9UKP4 1686 aa12.41□□□□□ -0.42
ZNF250-209ENST00000533543 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
ZNF250-209ENST00000533543 TEFQ10587 303 aa12.4□□□□□ -0.42
ZNF250-209ENST00000533543 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
ZNF250-209ENST00000533543 ZNF831Q5JPB2 1677 aa12.39□□□□□ -0.43
ZNF250-209ENST00000533543 KCPQ6ZWJ8 1503 aa12.39□□□□□ -0.43
ZNF250-209ENST00000533543 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
ZNF250-209ENST00000533543 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms