RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 MIS18AQ9NYP9 233 aa15.8■□□□□ 0.12
TGFBR3-211ENST00000533370 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
TGFBR3-211ENST00000533370 SLIT2O94813 1529 aa15.79■□□□□ 0.12
TGFBR3-211ENST00000533370 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
TGFBR3-211ENST00000533370 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
TGFBR3-211ENST00000533370 C8orf37Q96NL8 207 aa15.79■□□□□ 0.12
TGFBR3-211ENST00000533370 SOS1Q07889 1333 aaPredicted RBP15.78■□□□□ 0.12
TGFBR3-211ENST00000533370 SPATA31A5Q5VU36 1347 aa15.78■□□□□ 0.12
TGFBR3-211ENST00000533370 SPATA31A7Q8IWB4 1347 aa15.78■□□□□ 0.12
TGFBR3-211ENST00000533370 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 EXOC5O00471 708 aa15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 BRPF1P55201 1214 aaPredicted RBP15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 IRX6P78412 446 aaPredicted RBP15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 VPS72Q15906 364 aa15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 BARGINQ6ZT62 677 aa15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
TGFBR3-211ENST00000533370 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 PLIN1O60240 522 aa15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 SLC52A2Q9HAB3 445 aa15.76■□□□□ 0.11
TGFBR3-211ENST00000533370 ERVV-2B6SEH9 535 aa15.75■□□□□ 0.11
TGFBR3-211ENST00000533370 SMC4Q9NTJ3 1288 aa15.75■□□□□ 0.11
TGFBR3-211ENST00000533370 CCDC9Q9Y3X0 531 aaKnown RBP15.75■□□□□ 0.11
TGFBR3-211ENST00000533370 DISP2A7MBM2 1401 aa15.75■□□□□ 0.11
TGFBR3-211ENST00000533370 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 MS4A1P11836 297 aa15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 USP21Q9UK80 565 aa15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 PKD1L3Q7Z443 1732 aa15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
TGFBR3-211ENST00000533370 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 BCL9LQ86UU0 1499 aa15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 CABP4P57796 275 aa15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 PARP4Q9UKK3 1724 aaKnown RBP15.73■□□□□ 0.11
TGFBR3-211ENST00000533370 KDM6AO15550 1401 aaPredicted RBP15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 KRT24Q2M2I5 525 aa15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 LRP6O75581 1613 aa15.72■□□□□ 0.11
TGFBR3-211ENST00000533370 ADAMTS7Q9UKP4 1686 aa15.71■□□□□ 0.11
TGFBR3-211ENST00000533370 HOXB7P09629 217 aa15.71■□□□□ 0.11
TGFBR3-211ENST00000533370 DSG3P32926 999 aa15.71■□□□□ 0.11
TGFBR3-211ENST00000533370 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.11
TGFBR3-211ENST00000533370 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
TGFBR3-211ENST00000533370 PPP4R2Q9NY27 417 aa15.71■□□□□ 0.11
TGFBR3-211ENST00000533370 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
TGFBR3-211ENST00000533370 DDB1Q16531 1140 aa15.7■□□□□ 0.1
TGFBR3-211ENST00000533370 ZNF790Q6PG37 636 aa15.7■□□□□ 0.1
TGFBR3-211ENST00000533370 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
TGFBR3-211ENST00000533370 NRAPQ86VF7 1730 aa15.7■□□□□ 0.1
TGFBR3-211ENST00000533370 KCNQ3O43525 872 aa15.69■□□□□ 0.1
TGFBR3-211ENST00000533370 C20orf194Q5TEA3 1177 aa15.69■□□□□ 0.1
TGFBR3-211ENST00000533370 CCDC30Q5VVM6 783 aa15.69■□□□□ 0.1
TGFBR3-211ENST00000533370 AFF2P51816 1311 aa15.68■□□□□ 0.1
TGFBR3-211ENST00000533370 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
TGFBR3-211ENST00000533370 HEG1Q9ULI3 1381 aa15.67■□□□□ 0.1
TGFBR3-211ENST00000533370 EXOC6Q8TAG9 804 aa15.67■□□□□ 0.1
TGFBR3-211ENST00000533370 FBXO41Q8TF61 875 aa15.67■□□□□ 0.1
TGFBR3-211ENST00000533370 CRBNQ96SW2 442 aa15.67■□□□□ 0.1
TGFBR3-211ENST00000533370 STK31Q9BXU1 1019 aa15.67■□□□□ 0.1
TGFBR3-211ENST00000533370 MRC1P22897 1456 aa15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 DZIP1LQ8IYY4 767 aaKnown RBP15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 GJD4Q96KN9 370 aaPredicted RBP15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 TRPC5Q9UL62 973 aaPredicted RBP15.66■□□□□ 0.1
TGFBR3-211ENST00000533370 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 TCERG1O14776 1098 aaKnown RBP15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 SLC39A6Q13433 755 aa15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 AAMPQ13685 434 aa15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 TMOD3Q9NYL9 352 aa15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
TGFBR3-211ENST00000533370 ONECUT3O60422 494 aaPredicted RBP15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 TRIM27P14373 513 aa15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 HDGFL1Q5TGJ6 251 aa15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 PANK1Q8TE04 598 aa15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 FMNL2Q96PY5 1086 aa15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 QTRT2Q9H974 415 aaKnown RBP15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 PTPRCP08575 1304 aa15.64■□□□□ 0.09
TGFBR3-211ENST00000533370 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
TGFBR3-211ENST00000533370 MARCH10Q8NA82 808 aaPredicted RBP15.63■□□□□ 0.09
TGFBR3-211ENST00000533370 ZNF496Q96IT1 587 aaPredicted RBP15.63■□□□□ 0.09
TGFBR3-211ENST00000533370 RLBP1P12271 317 aa15.62■□□□□ 0.09
TGFBR3-211ENST00000533370 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
TGFBR3-211ENST00000533370 PIGBQ92521 554 aa15.62■□□□□ 0.09
TGFBR3-211ENST00000533370 CLUAP1Q96AJ1 413 aa15.62■□□□□ 0.09
TGFBR3-211ENST00000533370 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
TGFBR3-211ENST00000533370 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms