RNA–Protein interactions for RNA: ENST00000533072.1

TTC17-212, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best)

Gene TTC17, Length 2,607 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-212ENST00000533072 KDRP35968 1356 aa6.92□□□□□ -1.3
TTC17-212ENST00000533072 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
TTC17-212ENST00000533072 MYBBP1AQ9BQG0 1328 aaKnown RBP6.92□□□□□ -1.3
TTC17-212ENST00000533072 HSP90AB1P08238 724 aaKnown RBP6.92□□□□□ -1.3
TTC17-212ENST00000533072 SULT6B1Q6IMI4 303 aa6.92□□□□□ -1.3
TTC17-212ENST00000533072 TRIM37O94972 964 aa6.91□□□□□ -1.3
TTC17-212ENST00000533072 NKX1-1Q15270 411 aaPredicted RBP6.91□□□□□ -1.3
TTC17-212ENST00000533072 FAM182BQ5T319 152 aa6.91□□□□□ -1.3
TTC17-212ENST00000533072 COL3A1P02461 1466 aaPredicted RBP6.91□□□□□ -1.3
TTC17-212ENST00000533072 HMGB2P26583 209 aaKnown RBP6.91□□□□□ -1.3
TTC17-212ENST00000533072 IFNL2Q8IZJ0 200 aa6.91□□□□□ -1.3
TTC17-212ENST00000533072 SP7Q8TDD2 431 aaPredicted RBP6.91□□□□□ -1.3
TTC17-212ENST00000533072 PNNQ9H307 717 aaKnown RBP6.91□□□□□ -1.3
TTC17-212ENST00000533072 U2SURPO15042 1029 aaKnown RBP6.9□□□□□ -1.3
TTC17-212ENST00000533072 PLSCR1O15162 318 aa6.9□□□□□ -1.3
TTC17-212ENST00000533072 APBA3O96018 575 aa6.9□□□□□ -1.3
TTC17-212ENST00000533072 PRKRIP1Q9H875 184 aaPredicted RBP6.9□□□□□ -1.3
TTC17-212ENST00000533072 RGPD1P0DJD0 1748 aa6.9□□□□□ -1.3
TTC17-212ENST00000533072 FCHSD2O94868 740 aa6.9□□□□□ -1.31
TTC17-212ENST00000533072 RGPD2P0DJD1 1756 aa6.89□□□□□ -1.31
TTC17-212ENST00000533072 CYP27B1O15528 508 aa6.89□□□□□ -1.31
TTC17-212ENST00000533072 PHKG2P15735 406 aa6.89□□□□□ -1.31
TTC17-212ENST00000533072 AEBP1Q8IUX7 1158 aa6.89□□□□□ -1.31
TTC17-212ENST00000533072 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
TTC17-212ENST00000533072 ZNF530Q6P9A1 599 aaPredicted RBP6.89□□□□□ -1.31
TTC17-212ENST00000533072 BBXQ8WY36 941 aaPredicted RBP6.89□□□□□ -1.31
TTC17-212ENST00000533072 PKD1L3Q7Z443 1732 aa6.89□□□□□ -1.31
TTC17-212ENST00000533072 MAP3K13O43283 966 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 ANP32CO43423 234 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 HMOX1P09601 288 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 U2AF1L5P0DN76 240 aaPredicted RBP6.88□□□□□ -1.31
TTC17-212ENST00000533072 U2AF1Q01081 240 aaKnown RBP eCLIP6.88□□□□□ -1.31
TTC17-212ENST00000533072 PAXIP1Q6ZW49 1069 aaPredicted RBP6.88□□□□□ -1.31
TTC17-212ENST00000533072 KIF12Q96FN5 646 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 CAMKK2Q96RR4 588 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 ERVV-2B6SEH9 535 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 NEFMP07197 916 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 PRIM1P49642 420 aaKnown RBP6.88□□□□□ -1.31
TTC17-212ENST00000533072 AKAP4Q5JQC9 854 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 GAS2L2Q8NHY3 880 aa6.88□□□□□ -1.31
TTC17-212ENST00000533072 EN1Q05925 392 aaPredicted RBP6.87□□□□□ -1.31
TTC17-212ENST00000533072 DEFB132Q7Z7B7 95 aa6.87□□□□□ -1.31
TTC17-212ENST00000533072 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
TTC17-212ENST00000533072 ACSBG1Q96GR2 724 aa6.87□□□□□ -1.31
TTC17-212ENST00000533072 RSPH6AQ9H0K4 717 aa6.87□□□□□ -1.31
TTC17-212ENST00000533072 PCDHB13Q9Y5F0 798 aa6.87□□□□□ -1.31
TTC17-212ENST00000533072 NHSQ6T4R5 1651 aa6.87□□□□□ -1.31
TTC17-212ENST00000533072 KCNQ2O43526 872 aa6.87□□□□□ -1.31
TTC17-212ENST00000533072 SLC27A3Q5K4L6 730 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 CFAP44Q96MT7 982 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 TNS1Q9HBL0 1735 aaKnown RBP6.86□□□□□ -1.31
TTC17-212ENST00000533072 GABBR2O75899 941 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 PRKAR2BP31323 418 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 EZH2Q15910 746 aaKnown RBP6.86□□□□□ -1.31
TTC17-212ENST00000533072 MTHFSDQ2M296 383 aaKnown RBP6.86□□□□□ -1.31
TTC17-212ENST00000533072 NBPF14Q5TI25 921 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
TTC17-212ENST00000533072 SYTL4Q96C24 671 aaPredicted RBP6.86□□□□□ -1.31
TTC17-212ENST00000533072 MS4A3Q96HJ5 214 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 TMOD3Q9NYL9 352 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 SHANK3Q9BYB0 1731 aa6.86□□□□□ -1.31
TTC17-212ENST00000533072 GALR2O43603 387 aaPredicted RBP6.85□□□□□ -1.31
TTC17-212ENST00000533072 HTATSF1O43719 755 aaKnown RBP6.85□□□□□ -1.31
TTC17-212ENST00000533072 WDR43Q15061 677 aaKnown RBP eCLIP6.85□□□□□ -1.31
TTC17-212ENST00000533072 VSIG10Q8N0Z9 540 aa6.85□□□□□ -1.31
TTC17-212ENST00000533072 RGPD3A6NKT7 1758 aaPredicted RBP6.85□□□□□ -1.31
TTC17-212ENST00000533072 RGPD4Q7Z3J3 1758 aa6.85□□□□□ -1.31
TTC17-212ENST00000533072 SBF2Q86WG5 1849 aa6.85□□□□□ -1.31
TTC17-212ENST00000533072 GNAT3A8MTJ3 354 aa6.85□□□□□ -1.31
TTC17-212ENST00000533072 CABP4P57796 275 aa6.85□□□□□ -1.31
TTC17-212ENST00000533072 RNMTO43148 476 aaKnown RBP6.84□□□□□ -1.31
TTC17-212ENST00000533072 CHRM1P11229 460 aaPredicted RBP6.84□□□□□ -1.31
TTC17-212ENST00000533072 CLCN6P51797 869 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 TXNRD1Q16881 649 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 MPRIPQ6WCQ1 1025 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 PTF1AQ7RTS3 328 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 MAP3K5Q99683 1374 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 PIGBQ92521 554 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 MAPK8IP3Q9UPT6 1336 aa6.84□□□□□ -1.31
TTC17-212ENST00000533072 RNF25Q96BH1 459 aaPredicted RBP6.83□□□□□ -1.32
TTC17-212ENST00000533072 PHACTR3Q96KR7 559 aa6.83□□□□□ -1.32
TTC17-212ENST00000533072 PLEKHF1Q96S99 279 aa6.83□□□□□ -1.32
TTC17-212ENST00000533072 TSHZ2Q9NRE2 1034 aa6.83□□□□□ -1.32
TTC17-212ENST00000533072 KDM6AO15550 1401 aaPredicted RBP6.83□□□□□ -1.32
TTC17-212ENST00000533072 IFNL1Q8IU54 200 aa6.83□□□□□ -1.32
TTC17-212ENST00000533072 RTF1Q92541 710 aaKnown RBP6.83□□□□□ -1.32
TTC17-212ENST00000533072 SLC52A2Q9HAB3 445 aa6.83□□□□□ -1.32
TTC17-212ENST00000533072 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
TTC17-212ENST00000533072 PCDHB8Q9UN66 801 aa6.83□□□□□ -1.32
TTC17-212ENST00000533072 DOT1LQ8TEK3 1739 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 NFE2L2Q16236 605 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 SGIP1Q9BQI5 828 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 STK32BQ9NY57 414 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 PALLDQ8WX93 1383 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 LMOD3Q0VAK6 560 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 ZNF467Q7Z7K2 595 aaPredicted RBP6.82□□□□□ -1.32
TTC17-212ENST00000533072 RUNDC1Q96C34 613 aa6.82□□□□□ -1.32
TTC17-212ENST00000533072 CCNL1Q9UK58 526 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms