RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-208ENST00000533062 ITPK1Q13572 414 aa15.37■□□□□ 0.05
CHORDC1-208ENST00000533062 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
CHORDC1-208ENST00000533062 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
CHORDC1-208ENST00000533062 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
CHORDC1-208ENST00000533062 PTGER2P43116 358 aa15.36■□□□□ 0.05
CHORDC1-208ENST00000533062 AMIGO3Q86WK7 504 aa15.36■□□□□ 0.05
CHORDC1-208ENST00000533062 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
CHORDC1-208ENST00000533062 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
CHORDC1-208ENST00000533062 COL23A1Q86Y22 540 aaPredicted RBP15.35■□□□□ 0.05
CHORDC1-208ENST00000533062 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
CHORDC1-208ENST00000533062 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
CHORDC1-208ENST00000533062 C5P01031 1676 aa15.35■□□□□ 0.05
CHORDC1-208ENST00000533062 RALBP1Q15311 655 aa15.34■□□□□ 0.05
CHORDC1-208ENST00000533062 AK7Q96M32 723 aa15.34■□□□□ 0.05
CHORDC1-208ENST00000533062 PHF14O94880 888 aa15.33■□□□□ 0.04
CHORDC1-208ENST00000533062 SLC39A6Q13433 755 aa15.33■□□□□ 0.04
CHORDC1-208ENST00000533062 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
CHORDC1-208ENST00000533062 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.04
CHORDC1-208ENST00000533062 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
CHORDC1-208ENST00000533062 FCHSD2O94868 740 aa15.32■□□□□ 0.04
CHORDC1-208ENST00000533062 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
CHORDC1-208ENST00000533062 MAP3K5Q99683 1374 aa15.32■□□□□ 0.04
CHORDC1-208ENST00000533062 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
CHORDC1-208ENST00000533062 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
CHORDC1-208ENST00000533062 TAF1LQ8IZX4 1826 aa15.31■□□□□ 0.04
CHORDC1-208ENST00000533062 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
CHORDC1-208ENST00000533062 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
CHORDC1-208ENST00000533062 GNPATO15228 680 aa15.3■□□□□ 0.04
CHORDC1-208ENST00000533062 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
CHORDC1-208ENST00000533062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
CHORDC1-208ENST00000533062 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
CHORDC1-208ENST00000533062 UTRNP46939 3433 aa15.29■□□□□ 0.04
CHORDC1-208ENST00000533062 MRC1P22897 1456 aa15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 TEFQ10587 303 aa15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 DCTN1Q14203 1278 aa15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 MCM10Q7L590 875 aa15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 ARXQ96QS3 562 aa15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 QSER1Q2KHR3 1735 aa15.28■□□□□ 0.04
CHORDC1-208ENST00000533062 HMGB2P26583 209 aaKnown RBP15.27■□□□□ 0.04
CHORDC1-208ENST00000533062 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.04
CHORDC1-208ENST00000533062 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
CHORDC1-208ENST00000533062 FHDC1Q9C0D6 1143 aaPredicted RBP15.27■□□□□ 0.04
CHORDC1-208ENST00000533062 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.04
CHORDC1-208ENST00000533062 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.03
CHORDC1-208ENST00000533062 SSFA2P28290 1259 aa15.26■□□□□ 0.03
CHORDC1-208ENST00000533062 POLD1P28340 1107 aa15.26■□□□□ 0.03
CHORDC1-208ENST00000533062 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
CHORDC1-208ENST00000533062 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
CHORDC1-208ENST00000533062 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
CHORDC1-208ENST00000533062 RTF1Q92541 710 aaKnown RBP15.25■□□□□ 0.03
CHORDC1-208ENST00000533062 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
CHORDC1-208ENST00000533062 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
CHORDC1-208ENST00000533062 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
CHORDC1-208ENST00000533062 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 KCNQ3O43525 872 aa15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 TTC5Q8N0Z6 440 aa15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 SYT17Q9BSW7 474 aa15.24■□□□□ 0.03
CHORDC1-208ENST00000533062 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 BTBD11A6QL63 1104 aa15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 NEFMP07197 916 aa15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
CHORDC1-208ENST00000533062 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 CCDC146Q8IYE0 955 aa15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 COL5A3P25940 1745 aaPredicted RBP15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 TJP1Q07157 1748 aa15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
CHORDC1-208ENST00000533062 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.03
CHORDC1-208ENST00000533062 CYP19A1P11511 503 aaPredicted RBP15.21■□□□□ 0.03
CHORDC1-208ENST00000533062 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.03
CHORDC1-208ENST00000533062 MIS18AQ9NYP9 233 aa15.21■□□□□ 0.03
CHORDC1-208ENST00000533062 HTATSF1O43719 755 aaKnown RBP15.2■□□□□ 0.02
CHORDC1-208ENST00000533062 PNNQ9H307 717 aaKnown RBP15.2■□□□□ 0.02
CHORDC1-208ENST00000533062 CCDC87Q9NVE4 849 aa15.2■□□□□ 0.02
CHORDC1-208ENST00000533062 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
CHORDC1-208ENST00000533062 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 RFC4P35249 363 aa15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 ZBTB1Q9Y2K1 713 aa15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
CHORDC1-208ENST00000533062 COL24A1Q17RW2 1714 aa15.18■□□□□ 0.02
CHORDC1-208ENST00000533062 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
CHORDC1-208ENST00000533062 CCDC184Q52MB2 194 aa15.18■□□□□ 0.02
CHORDC1-208ENST00000533062 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
CHORDC1-208ENST00000533062 FMNL2Q96PY5 1086 aa15.18■□□□□ 0.02
CHORDC1-208ENST00000533062 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
CHORDC1-208ENST00000533062 UBR2Q8IWV8 1755 aa15.17■□□□□ 0.02
CHORDC1-208ENST00000533062 PRAMEF22A3QJZ6 481 aa15.17■□□□□ 0.02
CHORDC1-208ENST00000533062 GYS1P13807 737 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms