RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 MCM10Q7L590 875 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 KDM4AO75164 1064 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 NEK4P51957 841 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 DDB1Q16531 1140 aa12.67□□□□□ -0.38
COLCA1-203ENST00000532918 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
COLCA1-203ENST00000532918 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
COLCA1-203ENST00000532918 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
COLCA1-203ENST00000532918 SPTY2D1Q68D10 685 aaPredicted RBP12.67□□□□□ -0.38
COLCA1-203ENST00000532918 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
COLCA1-203ENST00000532918 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
COLCA1-203ENST00000532918 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 DUOX2Q9NRD8 1548 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 CCDC66A2RUB6 948 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 BLOC1S2Q6QNY1 142 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 DNAAF4Q8WXU2 420 aa12.66□□□□□ -0.38
COLCA1-203ENST00000532918 DESP17661 470 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 CDR1P51861 262 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 PPP4R3AQ6IN85 833 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 MTERF4Q7Z6M4 381 aaKnown RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 HDAC9Q9UKV0 1011 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
COLCA1-203ENST00000532918 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 ZNF444Q8N0Y2 327 aaPredicted RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.38
COLCA1-203ENST00000532918 CHRNA2Q15822 529 aa12.65□□□□□ -0.39
COLCA1-203ENST00000532918 SMARCE1Q969G3 411 aa12.65□□□□□ -0.39
COLCA1-203ENST00000532918 ZNF526Q8TF50 670 aaPredicted RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 CUL5Q93034 780 aa12.64□□□□□ -0.39
COLCA1-203ENST00000532918 CDCA7Q9BWT1 371 aaPredicted RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 BCAR3O75815 825 aa12.64□□□□□ -0.39
COLCA1-203ENST00000532918 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 BAG3O95817 575 aa12.64□□□□□ -0.39
COLCA1-203ENST00000532918 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
COLCA1-203ENST00000532918 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
COLCA1-203ENST00000532918 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
COLCA1-203ENST00000532918 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
COLCA1-203ENST00000532918 GSTO1P78417 241 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-203ENST00000532918 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
COLCA1-203ENST00000532918 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 CCDC191Q8NCU4 936 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 CWC15Q9P013 229 aaKnown RBP12.63□□□□□ -0.39
COLCA1-203ENST00000532918 NAPBQ9H115 298 aa12.63□□□□□ -0.39
COLCA1-203ENST00000532918 TXLNBQ8N3L3 684 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
COLCA1-203ENST00000532918 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 MBD3O95983 291 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 ATP10BO94823 1461 aa12.62□□□□□ -0.39
COLCA1-203ENST00000532918 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
COLCA1-203ENST00000532918 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 PARP3Q9Y6F1 533 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 PTPRCP08575 1304 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 IL2RBP14784 551 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 GPTP24298 496 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
COLCA1-203ENST00000532918 DHX8Q14562 1220 aaKnown RBP12.61□□□□□ -0.39
COLCA1-203ENST00000532918 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 NF2P35240 595 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 SCLT1Q96NL6 688 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 FEZ1Q99689 392 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 BIVM-ERCC5R4GMW8 1640 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
COLCA1-203ENST00000532918 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
COLCA1-203ENST00000532918 IL1RAPL2Q9NP60 686 aa12.61□□□□□ -0.39
COLCA1-203ENST00000532918 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
COLCA1-203ENST00000532918 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
COLCA1-203ENST00000532918 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
COLCA1-203ENST00000532918 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms