RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
SSH3-210ENST00000532881 BAG4O95429 457 aaKnown RBP18.34■□□□□ 0.53
SSH3-210ENST00000532881 GNAI2P04899 355 aa18.34■□□□□ 0.53
SSH3-210ENST00000532881 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
SSH3-210ENST00000532881 RABEP1Q15276 862 aa18.34■□□□□ 0.53
SSH3-210ENST00000532881 NCLP19338 710 aaKnown RBP18.33■□□□□ 0.52
SSH3-210ENST00000532881 NALCNQ8IZF0 1738 aa18.33■□□□□ 0.52
SSH3-210ENST00000532881 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
SSH3-210ENST00000532881 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
SSH3-210ENST00000532881 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
SSH3-210ENST00000532881 TTC21AQ8NDW8 1320 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 KDRP35968 1356 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 KCNQ3O43525 872 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 IL25Q9H293 177 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 LGR6Q9HBX8 967 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 HMMRO75330 724 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 MRE11P49959 708 aa18.32■□□□□ 0.52
SSH3-210ENST00000532881 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
SSH3-210ENST00000532881 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
SSH3-210ENST00000532881 DTNBO60941 627 aa18.31■□□□□ 0.52
SSH3-210ENST00000532881 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
SSH3-210ENST00000532881 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
SSH3-210ENST00000532881 TBX22Q9Y458 520 aa18.31■□□□□ 0.52
SSH3-210ENST00000532881 ERC2O15083 957 aa18.3■□□□□ 0.52
SSH3-210ENST00000532881 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
SSH3-210ENST00000532881 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
SSH3-210ENST00000532881 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
SSH3-210ENST00000532881 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
SSH3-210ENST00000532881 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
SSH3-210ENST00000532881 FMN2Q9NZ56 1722 aa18.29■□□□□ 0.52
SSH3-210ENST00000532881 NEK4P51957 841 aa18.29■□□□□ 0.52
SSH3-210ENST00000532881 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
SSH3-210ENST00000532881 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
SSH3-210ENST00000532881 LRRC59Q96AG4 307 aaKnown RBP18.29■□□□□ 0.52
SSH3-210ENST00000532881 ZDHHC9Q9Y397 364 aa18.29■□□□□ 0.52
SSH3-210ENST00000532881 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
SSH3-210ENST00000532881 MX1P20591 662 aa18.28■□□□□ 0.52
SSH3-210ENST00000532881 HDGFL1Q5TGJ6 251 aa18.28■□□□□ 0.52
SSH3-210ENST00000532881 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
SSH3-210ENST00000532881 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
SSH3-210ENST00000532881 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
SSH3-210ENST00000532881 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
SSH3-210ENST00000532881 ATP8B2P98198 1209 aa18.27■□□□□ 0.51
SSH3-210ENST00000532881 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.51
SSH3-210ENST00000532881 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.51
SSH3-210ENST00000532881 SALL3Q9BXA9 1300 aa18.26■□□□□ 0.51
SSH3-210ENST00000532881 REC8O95072 547 aa18.26■□□□□ 0.51
SSH3-210ENST00000532881 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
SSH3-210ENST00000532881 CAVIN1Q6NZI2 390 aaKnown RBP18.26■□□□□ 0.51
SSH3-210ENST00000532881 LARP6Q9BRS8 491 aaKnown RBP18.26■□□□□ 0.51
SSH3-210ENST00000532881 PRPF40AO75400 957 aaKnown RBP18.26■□□□□ 0.51
SSH3-210ENST00000532881 ST18O60284 1047 aa18.25■□□□□ 0.51
SSH3-210ENST00000532881 NSFL1CQ9UNZ2 370 aaKnown RBP18.25■□□□□ 0.51
SSH3-210ENST00000532881 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
SSH3-210ENST00000532881 ESYT1Q9BSJ8 1104 aa18.25■□□□□ 0.51
SSH3-210ENST00000532881 MAP3K5Q99683 1374 aa18.25■□□□□ 0.51
SSH3-210ENST00000532881 TPRNQ4KMQ1 711 aa18.24■□□□□ 0.51
SSH3-210ENST00000532881 MPRIPQ6WCQ1 1025 aa18.24■□□□□ 0.51
SSH3-210ENST00000532881 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
SSH3-210ENST00000532881 CHPF2Q9P2E5 772 aa18.24■□□□□ 0.51
SSH3-210ENST00000532881 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
SSH3-210ENST00000532881 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
SSH3-210ENST00000532881 PPP1R42Q7Z4L9 355 aa18.24■□□□□ 0.51
SSH3-210ENST00000532881 LMBRD1Q9NUN5 540 aa18.24■□□□□ 0.51
SSH3-210ENST00000532881 NWD1Q149M9 1564 aa18.23■□□□□ 0.51
SSH3-210ENST00000532881 SURF6O75683 361 aaKnown RBP18.23■□□□□ 0.51
SSH3-210ENST00000532881 GNAI3P08754 354 aa18.23■□□□□ 0.51
SSH3-210ENST00000532881 CHMLP26374 656 aa18.23■□□□□ 0.51
SSH3-210ENST00000532881 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
SSH3-210ENST00000532881 LMOD2Q6P5Q4 547 aa18.23■□□□□ 0.51
SSH3-210ENST00000532881 TMX3Q96JJ7 454 aa18.23■□□□□ 0.51
SSH3-210ENST00000532881 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
SSH3-210ENST00000532881 GOLGA6L22H0YM25 854 aa18.22■□□□□ 0.51
SSH3-210ENST00000532881 SKOR2Q2VWA4 1001 aaPredicted RBP18.22■□□□□ 0.51
SSH3-210ENST00000532881 ESCO1Q5FWF5 840 aa18.22■□□□□ 0.51
SSH3-210ENST00000532881 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
SSH3-210ENST00000532881 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
SSH3-210ENST00000532881 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
SSH3-210ENST00000532881 PHF8Q9UPP1 1060 aa18.21■□□□□ 0.51
SSH3-210ENST00000532881 SOS1Q07889 1333 aaPredicted RBP18.21■□□□□ 0.5
SSH3-210ENST00000532881 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
SSH3-210ENST00000532881 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
SSH3-210ENST00000532881 NUCB2P80303 420 aa18.19■□□□□ 0.5
SSH3-210ENST00000532881 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
SSH3-210ENST00000532881 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
SSH3-210ENST00000532881 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
SSH3-210ENST00000532881 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
SSH3-210ENST00000532881 CLEC17AQ6ZS10 378 aa18.18■□□□□ 0.5
SSH3-210ENST00000532881 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
SSH3-210ENST00000532881 GDPD2Q9HCC8 539 aa18.18■□□□□ 0.5
SSH3-210ENST00000532881 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
SSH3-210ENST00000532881 PSME1Q06323 249 aa18.18■□□□□ 0.5
SSH3-210ENST00000532881 ZSCAN23Q3MJ62 389 aa18.18■□□□□ 0.5
SSH3-210ENST00000532881 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
SSH3-210ENST00000532881 SLIT1O75093 1534 aa18.17■□□□□ 0.5
SSH3-210ENST00000532881 SRCIN1Q9C0H9 1055 aa18.17■□□□□ 0.5
SSH3-210ENST00000532881 CPA1P15085 419 aa18.17■□□□□ 0.5
SSH3-210ENST00000532881 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
SSH3-210ENST00000532881 ORAI2Q96SN7 254 aa18.17■□□□□ 0.5
SSH3-210ENST00000532881 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms