RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
CAPRIN1-212ENST00000532820 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
CAPRIN1-212ENST00000532820 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
CAPRIN1-212ENST00000532820 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
CAPRIN1-212ENST00000532820 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
CAPRIN1-212ENST00000532820 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
CAPRIN1-212ENST00000532820 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
CAPRIN1-212ENST00000532820 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
CAPRIN1-212ENST00000532820 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
CAPRIN1-212ENST00000532820 ATP10DQ9P241 1426 aa16.73■□□□□ 0.27
CAPRIN1-212ENST00000532820 SLIT3O75094 1523 aa16.72■□□□□ 0.27
CAPRIN1-212ENST00000532820 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
CAPRIN1-212ENST00000532820 RAPGEF4Q8WZA2 1011 aa16.72■□□□□ 0.27
CAPRIN1-212ENST00000532820 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
CAPRIN1-212ENST00000532820 TRPM3Q9HCF6 1732 aaPredicted RBP16.72■□□□□ 0.27
CAPRIN1-212ENST00000532820 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
CAPRIN1-212ENST00000532820 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
CAPRIN1-212ENST00000532820 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
CAPRIN1-212ENST00000532820 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
CAPRIN1-212ENST00000532820 EXOC6BQ9Y2D4 811 aa16.71■□□□□ 0.27
CAPRIN1-212ENST00000532820 BRINP3Q76B58 766 aa16.71■□□□□ 0.27
CAPRIN1-212ENST00000532820 VIRMAQ69YN4 1812 aaKnown RBP16.7■□□□□ 0.26
CAPRIN1-212ENST00000532820 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
CAPRIN1-212ENST00000532820 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
CAPRIN1-212ENST00000532820 GNAI2P04899 355 aa16.69■□□□□ 0.26
CAPRIN1-212ENST00000532820 PLEKHM2Q8IWE5 1019 aa16.69■□□□□ 0.26
CAPRIN1-212ENST00000532820 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
CAPRIN1-212ENST00000532820 PNMA6EA0A0J9YXQ4 647 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 BMP2KLQ5H9B9 411 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 BABAM1Q9NWV8 329 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 TSHZ3Q63HK5 1081 aa16.68■□□□□ 0.26
CAPRIN1-212ENST00000532820 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
CAPRIN1-212ENST00000532820 SPATA31A3Q5VYP0 1347 aa16.67■□□□□ 0.26
CAPRIN1-212ENST00000532820 TATP17735 454 aaPredicted RBP16.67■□□□□ 0.26
CAPRIN1-212ENST00000532820 USP44Q9H0E7 712 aa16.67■□□□□ 0.26
CAPRIN1-212ENST00000532820 SLAIN2Q9P270 581 aa16.67■□□□□ 0.26
CAPRIN1-212ENST00000532820 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
CAPRIN1-212ENST00000532820 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
CAPRIN1-212ENST00000532820 AIMP1Q12904 312 aaKnown RBP16.66■□□□□ 0.26
CAPRIN1-212ENST00000532820 HMMRO75330 724 aa16.65■□□□□ 0.26
CAPRIN1-212ENST00000532820 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
CAPRIN1-212ENST00000532820 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
CAPRIN1-212ENST00000532820 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
CAPRIN1-212ENST00000532820 TBC1D2Q9BYX2 928 aa16.65■□□□□ 0.26
CAPRIN1-212ENST00000532820 PRDM11Q9NQV5 511 aa16.65■□□□□ 0.26
CAPRIN1-212ENST00000532820 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
CAPRIN1-212ENST00000532820 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
CAPRIN1-212ENST00000532820 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
CAPRIN1-212ENST00000532820 GNAI3P08754 354 aa16.64■□□□□ 0.25
CAPRIN1-212ENST00000532820 BECN1Q14457 450 aa16.64■□□□□ 0.25
CAPRIN1-212ENST00000532820 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
CAPRIN1-212ENST00000532820 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 DCCP43146 1447 aa16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 MEGF6O75095 1541 aa16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 LMTK3Q96Q04 1460 aa16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 PHKG2P15735 406 aa16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
CAPRIN1-212ENST00000532820 MYL6BP14649 208 aa16.62■□□□□ 0.25
CAPRIN1-212ENST00000532820 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
CAPRIN1-212ENST00000532820 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
CAPRIN1-212ENST00000532820 CYP27B1O15528 508 aa16.62■□□□□ 0.25
CAPRIN1-212ENST00000532820 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
CAPRIN1-212ENST00000532820 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 MAP3K2Q9Y2U5 619 aa16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
CAPRIN1-212ENST00000532820 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 ATP8B2P98198 1209 aa16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 SOS1Q07889 1333 aaPredicted RBP16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 SDSP20132 328 aa16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 IFNL2Q8IZJ0 200 aa16.6■□□□□ 0.25
CAPRIN1-212ENST00000532820 PPP1R42Q7Z4L9 355 aa16.59■□□□□ 0.25
CAPRIN1-212ENST00000532820 LMO7Q8WWI1 1683 aa16.59■□□□□ 0.25
CAPRIN1-212ENST00000532820 CDC45O75419 566 aa16.59■□□□□ 0.25
CAPRIN1-212ENST00000532820 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-212ENST00000532820 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
CAPRIN1-212ENST00000532820 ADCY9O60503 1353 aa16.59■□□□□ 0.25
CAPRIN1-212ENST00000532820 HOXB7P09629 217 aa16.58■□□□□ 0.25
CAPRIN1-212ENST00000532820 NCOA3Q9Y6Q9 1424 aa16.58■□□□□ 0.25
CAPRIN1-212ENST00000532820 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
CAPRIN1-212ENST00000532820 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
CAPRIN1-212ENST00000532820 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
CAPRIN1-212ENST00000532820 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
CAPRIN1-212ENST00000532820 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-212ENST00000532820 STRCQ7RTU9 1775 aa16.57■□□□□ 0.24
CAPRIN1-212ENST00000532820 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-212ENST00000532820 XIRP1Q702N8 1843 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-212ENST00000532820 ANO8Q9HCE9 1232 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms