RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 USP26Q9BXU7 913 aa7.21□□□□□ -1.26
RDX-213ENST00000532461 NUP188Q5SRE5 1749 aa7.2□□□□□ -1.26
RDX-213ENST00000532461 CYP2E1P05181 493 aaPredicted RBP7.2□□□□□ -1.26
RDX-213ENST00000532461 MFAP1P55081 439 aaKnown RBP7.2□□□□□ -1.26
RDX-213ENST00000532461 SLC26A8Q96RN1 970 aa7.2□□□□□ -1.26
RDX-213ENST00000532461 KCNA6P17658 529 aa7.2□□□□□ -1.26
RDX-213ENST00000532461 HSCBQ8IWL3 235 aa7.2□□□□□ -1.26
RDX-213ENST00000532461 DNAJC5Q9H3Z4 198 aa7.2□□□□□ -1.26
RDX-213ENST00000532461 USP42Q9H9J4 1324 aaKnown RBP7.2□□□□□ -1.26
RDX-213ENST00000532461 DDX11L8A8MPP1 907 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 CEBPAP49715 358 aaPredicted RBP7.19□□□□□ -1.26
RDX-213ENST00000532461 RABEP1Q15276 862 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 ABCA3Q99758 1704 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 NPHP4O75161 1426 aaPredicted RBP7.19□□□□□ -1.26
RDX-213ENST00000532461 SHANK3Q9BYB0 1731 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 K7ELQ4 463 aaPredicted RBP7.19□□□□□ -1.26
RDX-213ENST00000532461 POLA2Q14181 598 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 CCDC30Q5VVM6 783 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 IL17REQ8NFR9 667 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 CHMP4AQ9BY43 222 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 C1orf115Q9H7X2 142 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 ARFGEF2Q9Y6D5 1785 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 HMMRO75330 724 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 SLC4A2P04920 1241 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 ATP8B2P98198 1209 aa7.19□□□□□ -1.26
RDX-213ENST00000532461 TAF7Q15545 349 aaPredicted RBP7.18□□□□□ -1.26
RDX-213ENST00000532461 KRT24Q2M2I5 525 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 L1TD1Q5T7N2 865 aaKnown RBP7.18□□□□□ -1.26
RDX-213ENST00000532461 KCNH5Q8NCM2 988 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 MEIS3Q99687 375 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 FOXO3O43524 673 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 GNAI3P08754 354 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 TSPYL4Q9UJ04 414 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 AFDNP55196 1824 aaKnown RBP7.18□□□□□ -1.26
RDX-213ENST00000532461 GNAI2P04899 355 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
RDX-213ENST00000532461 SRCIN1Q9C0H9 1055 aa7.18□□□□□ -1.26
RDX-213ENST00000532461 CD2BP2O95400 341 aaKnown RBP7.17□□□□□ -1.26
RDX-213ENST00000532461 SDSP20132 328 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 FLIIQ13045 1269 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 MTX1Q13505 466 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 SKOR2Q2VWA4 1001 aaPredicted RBP7.17□□□□□ -1.26
RDX-213ENST00000532461 G2E3Q7L622 706 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 NGDNQ8NEJ9 315 aaKnown RBP7.17□□□□□ -1.26
RDX-213ENST00000532461 SSH3Q8TE77 659 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 COL15A1P39059 1388 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 PXDNQ92626 1479 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 ELL2O00472 640 aaPredicted RBP7.17□□□□□ -1.26
RDX-213ENST00000532461 ANAPC15P60006 121 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 PHF8Q9UPP1 1060 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 UTYO14607 1347 aa7.17□□□□□ -1.26
RDX-213ENST00000532461 AMPHP49418 695 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 PDE1AP54750 535 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 KLHL34Q8N239 644 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 NLRP6P59044 892 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 ANKLE2Q86XL3 938 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 FAM43AQ8N2R8 423 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 SLKQ9H2G2 1235 aaPredicted RBP7.16□□□□□ -1.26
RDX-213ENST00000532461 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
RDX-213ENST00000532461 TJP1Q07157 1748 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 RAB11FIP3O75154 756 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 EIF4A1P60842 406 aaKnown RBP7.16□□□□□ -1.26
RDX-213ENST00000532461 TNPO1Q92973 898 aaKnown RBP7.16□□□□□ -1.26
RDX-213ENST00000532461 TMEM94Q12767 1356 aa7.16□□□□□ -1.26
RDX-213ENST00000532461 DDX60Q8IY21 1712 aaKnown RBP7.15□□□□□ -1.26
RDX-213ENST00000532461 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
RDX-213ENST00000532461 AKAP4Q5JQC9 854 aa7.15□□□□□ -1.26
RDX-213ENST00000532461 USP44Q9H0E7 712 aa7.15□□□□□ -1.26
RDX-213ENST00000532461 C1orf167Q5SNV9 1468 aa7.15□□□□□ -1.26
RDX-213ENST00000532461 TRAK2O60296 914 aa7.15□□□□□ -1.27
RDX-213ENST00000532461 REC8O95072 547 aa7.15□□□□□ -1.27
RDX-213ENST00000532461 ARHGEF25Q86VW2 580 aa7.15□□□□□ -1.27
RDX-213ENST00000532461 C16orf71Q8IYS4 520 aaPredicted RBP7.15□□□□□ -1.27
RDX-213ENST00000532461 ADCY9O60503 1353 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 ERC2O15083 957 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 PLEKHG5O94827 1062 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 STK31Q9BXU1 1019 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 SPEF2Q9C093 1822 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 CUL4AQ13619 759 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 CASC1Q6TDU7 716 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 OTUD7AQ8TE49 926 aaPredicted RBP7.14□□□□□ -1.27
RDX-213ENST00000532461 GBP4Q96PP9 640 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 LRRCC1Q9C099 1032 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 SNRKQ9NRH2 765 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 MYH15Q9Y2K3 1946 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 MCM2P49736 904 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 BEND3Q5T5X7 828 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 ABTB2Q8N961 1025 aa7.14□□□□□ -1.27
RDX-213ENST00000532461 NBPF6Q5VWK0 638 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 KCNB2Q92953 911 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 NBPF4Q96M43 638 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 WNK3Q9BYP7 1800 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 JCADQ9P266 1359 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 MRE11P49959 708 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 NUCB2P80303 420 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 INTS4Q96HW7 963 aaKnown RBP7.13□□□□□ -1.27
RDX-213ENST00000532461 ESYT1Q9BSJ8 1104 aa7.13□□□□□ -1.27
RDX-213ENST00000532461 PNMA6EA0A0J9YXQ4 647 aa7.12□□□□□ -1.27
RDX-213ENST00000532461 XRCC6P12956 609 aaKnown RBP eCLIP7.12□□□□□ -1.27
RDX-213ENST00000532461 MIS18AQ9NYP9 233 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms