RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 HMGB2P26583 209 aaKnown RBP27.48■■□□□ 1.99
CCS-207ENST00000531990 TEFQ10587 303 aa27.48■■□□□ 1.99
CCS-207ENST00000531990 CCDC146Q8IYE0 955 aa27.48■■□□□ 1.99
CCS-207ENST00000531990 RUNDC1Q96C34 613 aa27.48■■□□□ 1.99
CCS-207ENST00000531990 ASAP1Q9ULH1 1129 aa27.48■■□□□ 1.99
CCS-207ENST00000531990 IL17REQ8NFR9 667 aa27.47■■□□□ 1.99
CCS-207ENST00000531990 ATG3Q9NT62 314 aa27.47■■□□□ 1.99
CCS-207ENST00000531990 LRRC4BQ9NT99 713 aa27.45■■□□□ 1.98
CCS-207ENST00000531990 STK32BQ9NY57 414 aa27.44■■□□□ 1.98
CCS-207ENST00000531990 CEMIPQ8WUJ3 1361 aa27.44■■□□□ 1.98
CCS-207ENST00000531990 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
CCS-207ENST00000531990 PNISRQ8TF01 805 aaKnown RBP27.43■■□□□ 1.98
CCS-207ENST00000531990 LOC102724428A0A0B4J2F2 783 aa27.42■■□□□ 1.98
CCS-207ENST00000531990 KCNQ4P56696 695 aa27.42■■□□□ 1.98
CCS-207ENST00000531990 SIK1P57059 783 aa27.42■■□□□ 1.98
CCS-207ENST00000531990 MCM10Q7L590 875 aa27.42■■□□□ 1.98
CCS-207ENST00000531990 SIPA1L3O60292 1781 aaPredicted RBP27.42■■□□□ 1.98
CCS-207ENST00000531990 PAPPAQ13219 1627 aa27.41■■□□□ 1.98
CCS-207ENST00000531990 C5P01031 1676 aa27.41■■□□□ 1.98
CCS-207ENST00000531990 TMPOP42166 694 aaKnown RBP27.41■■□□□ 1.98
CCS-207ENST00000531990 RIPK4P57078 832 aa27.41■■□□□ 1.98
CCS-207ENST00000531990 R3HDM1Q15032 1099 aaKnown RBP27.41■■□□□ 1.98
CCS-207ENST00000531990 RBM42Q9BTD8 480 aaKnown RBP27.41■■□□□ 1.98
CCS-207ENST00000531990 PSDA5PKW4 1024 aaPredicted RBP27.4■■□□□ 1.98
CCS-207ENST00000531990 LMOD3Q0VAK6 560 aa27.4■■□□□ 1.98
CCS-207ENST00000531990 ANO8Q9HCE9 1232 aaPredicted RBP27.4■■□□□ 1.98
CCS-207ENST00000531990 TAF1LQ8IZX4 1826 aa27.39■■□□□ 1.98
CCS-207ENST00000531990 ATP6V1AP38606 617 aa27.39■■□□□ 1.98
CCS-207ENST00000531990 DCTN1Q14203 1278 aa27.39■■□□□ 1.98
CCS-207ENST00000531990 SLC15A2Q16348 729 aa27.38■■□□□ 1.97
CCS-207ENST00000531990 TTC5Q8N0Z6 440 aa27.38■■□□□ 1.97
CCS-207ENST00000531990 ZNF831Q5JPB2 1677 aa27.37■■□□□ 1.97
CCS-207ENST00000531990 PTCD1O75127 700 aaKnown RBP27.37■■□□□ 1.97
CCS-207ENST00000531990 NEUROD2Q15784 382 aa27.37■■□□□ 1.97
CCS-207ENST00000531990 RRP7AQ9Y3A4 280 aaKnown RBP27.37■■□□□ 1.97
CCS-207ENST00000531990 SLC39A6Q13433 755 aa27.36■■□□□ 1.97
CCS-207ENST00000531990 BTBD11A6QL63 1104 aa27.35■■□□□ 1.97
CCS-207ENST00000531990 TAF7Q15545 349 aaPredicted RBP27.33■■□□□ 1.97
CCS-207ENST00000531990 C4BP0C0L5 1744 aa27.33■■□□□ 1.96
CCS-207ENST00000531990 UBR2Q8IWV8 1755 aa27.32■■□□□ 1.96
CCS-207ENST00000531990 APAF1O14727 1248 aa27.32■■□□□ 1.96
CCS-207ENST00000531990 ZNF827Q17R98 1081 aa27.32■■□□□ 1.96
CCS-207ENST00000531990 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
CCS-207ENST00000531990 AKT1S1Q96B36 256 aa27.32■■□□□ 1.96
CCS-207ENST00000531990 ITPK1Q13572 414 aa27.31■■□□□ 1.96
CCS-207ENST00000531990 FAM9BQ8IZU0 186 aa27.31■■□□□ 1.96
CCS-207ENST00000531990 TFCP2L1Q9NZI6 479 aa27.31■■□□□ 1.96
CCS-207ENST00000531990 KCPQ6ZWJ8 1503 aa27.31■■□□□ 1.96
CCS-207ENST00000531990 CCER2I3L3R5 266 aa27.3■■□□□ 1.96
CCS-207ENST00000531990 SLC4A9Q96Q91 983 aa27.3■■□□□ 1.96
CCS-207ENST00000531990 THUMPD2Q9BTF0 503 aaKnown RBP27.3■■□□□ 1.96
CCS-207ENST00000531990 LINC00116Q8NCU8 138 aa27.29■■□□□ 1.96
CCS-207ENST00000531990 AK7Q96M32 723 aa27.29■■□□□ 1.96
CCS-207ENST00000531990 CICQ96RK0 1608 aaPredicted RBP27.29■■□□□ 1.96
CCS-207ENST00000531990 QSER1Q2KHR3 1735 aa27.29■■□□□ 1.96
CCS-207ENST00000531990 COL5A3P25940 1745 aaPredicted RBP27.28■■□□□ 1.96
CCS-207ENST00000531990 TJP1Q07157 1748 aa27.27■■□□□ 1.96
CCS-207ENST00000531990 VSIG10Q8N0Z9 540 aa27.27■■□□□ 1.96
CCS-207ENST00000531990 FMNL2Q96PY5 1086 aa27.27■■□□□ 1.96
CCS-207ENST00000531990 TUBGCP6Q96RT7 1819 aa27.26■■□□□ 1.95
CCS-207ENST00000531990 ZNF496Q96IT1 587 aaPredicted RBP27.26■■□□□ 1.95
CCS-207ENST00000531990 TRIM35Q9UPQ4 493 aa27.26■■□□□ 1.95
CCS-207ENST00000531990 KDM3BQ7LBC6 1761 aa27.24■■□□□ 1.95
CCS-207ENST00000531990 CASZ1Q86V15 1759 aa27.24■■□□□ 1.95
CCS-207ENST00000531990 HEG1Q9ULI3 1381 aa27.23■■□□□ 1.95
CCS-207ENST00000531990 KCNQ3O43525 872 aa27.23■■□□□ 1.95
CCS-207ENST00000531990 RC3H1Q5TC82 1133 aaKnown RBP27.23■■□□□ 1.95
CCS-207ENST00000531990 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
CCS-207ENST00000531990 FLAD1Q8NFF5 587 aa27.23■■□□□ 1.95
CCS-207ENST00000531990 MIS18AQ9NYP9 233 aa27.23■■□□□ 1.95
CCS-207ENST00000531990 CNTNAP4Q9C0A0 1308 aa27.22■■□□□ 1.95
CCS-207ENST00000531990 UBR3Q6ZT12 1888 aa27.22■■□□□ 1.95
CCS-207ENST00000531990 GNPATO15228 680 aa27.22■■□□□ 1.95
CCS-207ENST00000531990 TEX13AQ9BXU3 409 aaPredicted RBP27.22■■□□□ 1.95
CCS-207ENST00000531990 CALD1Q05682 793 aaKnown RBP27.21■■□□□ 1.95
CCS-207ENST00000531990 PNPLA7Q6ZV29 1317 aa27.2■■□□□ 1.95
CCS-207ENST00000531990 MIER1Q8N108 512 aa27.2■■□□□ 1.94
CCS-207ENST00000531990 BABAM1Q9NWV8 329 aa27.2■■□□□ 1.94
CCS-207ENST00000531990 TSPYL4Q9UJ04 414 aa27.2■■□□□ 1.94
CCS-207ENST00000531990 MSH5O43196 834 aa27.19■■□□□ 1.94
CCS-207ENST00000531990 STARD3NLO95772 234 aa27.19■■□□□ 1.94
CCS-207ENST00000531990 CRKLP46109 303 aaKnown RBP27.19■■□□□ 1.94
CCS-207ENST00000531990 RTCBQ9Y3I0 505 aaKnown RBP27.19■■□□□ 1.94
CCS-207ENST00000531990 SSFA2P28290 1259 aa27.18■■□□□ 1.94
CCS-207ENST00000531990 PDGFDQ9GZP0 370 aaPredicted RBP27.18■■□□□ 1.94
CCS-207ENST00000531990 MYH14Q7Z406 1995 aaKnown RBP27.17■■□□□ 1.94
CCS-207ENST00000531990 PHF14O94880 888 aa27.17■■□□□ 1.94
CCS-207ENST00000531990 CYP19A1P11511 503 aaPredicted RBP27.17■■□□□ 1.94
CCS-207ENST00000531990 LAS1LQ9Y4W2 734 aaKnown RBP27.17■■□□□ 1.94
CCS-207ENST00000531990 SNRPA1P09661 255 aaKnown RBP27.16■■□□□ 1.94
CCS-207ENST00000531990 CCDC27Q2M243 656 aa27.16■■□□□ 1.94
CCS-207ENST00000531990 NCBP3Q53F19 620 aaKnown RBP27.16■■□□□ 1.94
CCS-207ENST00000531990 COL23A1Q86Y22 540 aaPredicted RBP27.16■■□□□ 1.94
CCS-207ENST00000531990 SLC16A10Q8TF71 515 aa27.16■■□□□ 1.94
CCS-207ENST00000531990 CCDC87Q9NVE4 849 aa27.16■■□□□ 1.94
CCS-207ENST00000531990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.15■■□□□ 1.94
CCS-207ENST00000531990 RPS6KA4O75676 772 aa27.15■■□□□ 1.94
CCS-207ENST00000531990 SENP3-EIF4A1A0A087X0R7 540 aa27.14■■□□□ 1.94
CCS-207ENST00000531990 ZBTB7AO95365 584 aa27.14■■□□□ 1.94
CCS-207ENST00000531990 SPON1Q9HCB6 807 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms