RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 PALLDQ8WX93 1383 aa14.46□□□□□ -0.1
GPATCH4-216ENST00000531900 MRC1P22897 1456 aa14.45□□□□□ -0.1
GPATCH4-216ENST00000531900 U2AF1L5P0DN76 240 aaPredicted RBP14.45□□□□□ -0.1
GPATCH4-216ENST00000531900 KCNQ4P56696 695 aa14.45□□□□□ -0.1
GPATCH4-216ENST00000531900 U2AF1Q01081 240 aaKnown RBP eCLIP14.45□□□□□ -0.1
GPATCH4-216ENST00000531900 ARXQ96QS3 562 aa14.45□□□□□ -0.1
GPATCH4-216ENST00000531900 ATG3Q9NT62 314 aa14.45□□□□□ -0.1
GPATCH4-216ENST00000531900 POLD1P28340 1107 aa14.44□□□□□ -0.1
GPATCH4-216ENST00000531900 PRKAR2BP31323 418 aa14.44□□□□□ -0.1
GPATCH4-216ENST00000531900 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
GPATCH4-216ENST00000531900 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
GPATCH4-216ENST00000531900 SYT17Q9BSW7 474 aa14.44□□□□□ -0.1
GPATCH4-216ENST00000531900 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
GPATCH4-216ENST00000531900 PNPLA7Q6ZV29 1317 aa14.43□□□□□ -0.1
GPATCH4-216ENST00000531900 RNMTO43148 476 aaKnown RBP14.43□□□□□ -0.1
GPATCH4-216ENST00000531900 CABP4P57796 275 aa14.43□□□□□ -0.1
GPATCH4-216ENST00000531900 NFATC2IPQ8NCF5 419 aa14.43□□□□□ -0.1
GPATCH4-216ENST00000531900 LGR6Q9HBX8 967 aa14.43□□□□□ -0.1
GPATCH4-216ENST00000531900 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
GPATCH4-216ENST00000531900 C5P01031 1676 aa14.42□□□□□ -0.1
GPATCH4-216ENST00000531900 LOC102724428A0A0B4J2F2 783 aa14.42□□□□□ -0.1
GPATCH4-216ENST00000531900 GNAT3A8MTJ3 354 aa14.42□□□□□ -0.1
GPATCH4-216ENST00000531900 YY1P25490 414 aa14.42□□□□□ -0.1
GPATCH4-216ENST00000531900 SIK1P57059 783 aa14.42□□□□□ -0.1
GPATCH4-216ENST00000531900 SLC52A2Q9HAB3 445 aa14.42□□□□□ -0.1
GPATCH4-216ENST00000531900 MSH5O43196 834 aa14.41□□□□□ -0.1
GPATCH4-216ENST00000531900 PLEKHF1Q96S99 279 aa14.41□□□□□ -0.1
GPATCH4-216ENST00000531900 CEMIPQ8WUJ3 1361 aa14.41□□□□□ -0.1
GPATCH4-216ENST00000531900 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
GPATCH4-216ENST00000531900 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
GPATCH4-216ENST00000531900 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
GPATCH4-216ENST00000531900 FLAD1Q8NFF5 587 aa14.4□□□□□ -0.1
GPATCH4-216ENST00000531900 IL17REQ8NFR9 667 aa14.4□□□□□ -0.1
GPATCH4-216ENST00000531900 PNNQ9H307 717 aaKnown RBP14.4□□□□□ -0.1
GPATCH4-216ENST00000531900 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.1
GPATCH4-216ENST00000531900 SIPA1L3O60292 1781 aaPredicted RBP14.39□□□□□ -0.11
GPATCH4-216ENST00000531900 COL24A1Q17RW2 1714 aa14.39□□□□□ -0.11
GPATCH4-216ENST00000531900 SLC4A9Q96Q91 983 aa14.39□□□□□ -0.11
GPATCH4-216ENST00000531900 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
GPATCH4-216ENST00000531900 UBR3Q6ZT12 1888 aa14.38□□□□□ -0.11
GPATCH4-216ENST00000531900 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 ITPK1Q13572 414 aa14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 COL23A1Q86Y22 540 aaPredicted RBP14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 AK7Q96M32 723 aa14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 COL5A3P25940 1745 aaPredicted RBP14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 DLG5Q8TDM6 1919 aa14.37□□□□□ -0.11
GPATCH4-216ENST00000531900 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
GPATCH4-216ENST00000531900 UBR2Q8IWV8 1755 aa14.36□□□□□ -0.11
GPATCH4-216ENST00000531900 MYH14Q7Z406 1995 aaKnown RBP14.36□□□□□ -0.11
GPATCH4-216ENST00000531900 VSIG10Q8N0Z9 540 aa14.35□□□□□ -0.11
GPATCH4-216ENST00000531900 LINC00116Q8NCU8 138 aa14.35□□□□□ -0.11
GPATCH4-216ENST00000531900 NEFMP07197 916 aa14.34□□□□□ -0.11
GPATCH4-216ENST00000531900 TEFQ10587 303 aa14.34□□□□□ -0.11
GPATCH4-216ENST00000531900 KCPQ6ZWJ8 1503 aa14.34□□□□□ -0.11
GPATCH4-216ENST00000531900 CNTNAP4Q9C0A0 1308 aa14.34□□□□□ -0.11
GPATCH4-216ENST00000531900 SSFA2P28290 1259 aa14.33□□□□□ -0.12
GPATCH4-216ENST00000531900 NFE2L2Q16236 605 aa14.33□□□□□ -0.12
GPATCH4-216ENST00000531900 GPR162Q16538 588 aa14.33□□□□□ -0.12
GPATCH4-216ENST00000531900 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-216ENST00000531900 TJP1Q07157 1748 aa14.32□□□□□ -0.12
GPATCH4-216ENST00000531900 ZNF790Q6PG37 636 aa14.32□□□□□ -0.12
GPATCH4-216ENST00000531900 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
GPATCH4-216ENST00000531900 PTCD1O75127 700 aaKnown RBP14.31□□□□□ -0.12
GPATCH4-216ENST00000531900 PHF14O94880 888 aa14.31□□□□□ -0.12
GPATCH4-216ENST00000531900 SLC39A6Q13433 755 aa14.31□□□□□ -0.12
GPATCH4-216ENST00000531900 MSL1Q68DK7 614 aa14.31□□□□□ -0.12
GPATCH4-216ENST00000531900 ADAMTS8Q9UP79 889 aa14.31□□□□□ -0.12
GPATCH4-216ENST00000531900 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
GPATCH4-216ENST00000531900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.3□□□□□ -0.12
GPATCH4-216ENST00000531900 ADRA2BP18089 450 aa14.3□□□□□ -0.12
GPATCH4-216ENST00000531900 WDR43Q15061 677 aaKnown RBP eCLIP14.3□□□□□ -0.12
GPATCH4-216ENST00000531900 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
GPATCH4-216ENST00000531900 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
GPATCH4-216ENST00000531900 GNPATO15228 680 aa14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 ANP32CO43423 234 aa14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 RPS6KA4O75676 772 aa14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 MCM10Q7L590 875 aa14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
GPATCH4-216ENST00000531900 BTBD11A6QL63 1104 aa14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 GOLGB1Q14789 3259 aaKnown RBP14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 ZNF496Q96IT1 587 aaPredicted RBP14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 TEX13AQ9BXU3 409 aaPredicted RBP14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 HEG1Q9ULI3 1381 aa14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 CD2APQ9Y5K6 639 aa14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 UTRNP46939 3433 aa14.28□□□□□ -0.12
GPATCH4-216ENST00000531900 CYP19A1P11511 503 aaPredicted RBP14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 DCTN1Q14203 1278 aa14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 NLGN2Q8NFZ4 835 aa14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
GPATCH4-216ENST00000531900 GRIN3BO60391 1043 aa14.26□□□□□ -0.13
GPATCH4-216ENST00000531900 RIPK4P57078 832 aa14.26□□□□□ -0.13
GPATCH4-216ENST00000531900 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms