RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 PARP2Q9UGN5 583 aa10.31□□□□□ -0.76
ARHGEF12-211ENST00000531616 ADCY10Q96PN6 1610 aa10.31□□□□□ -0.76
ARHGEF12-211ENST00000531616 JAMLQ86YT9 394 aa10.31□□□□□ -0.76
ARHGEF12-211ENST00000531616 HLA-CQ95604 372 aa10.31□□□□□ -0.76
ARHGEF12-211ENST00000531616 RBL2Q08999 1139 aa10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 SAFB2Q14151 953 aaKnown RBP eCLIP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 FTSJ3Q8IY81 847 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 RNPC3Q96LT9 517 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 DUSP9Q99956 384 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 TPX2Q9ULW0 747 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 SETD1BQ9UPS6 1966 aaKnown RBP10.3□□□□□ -0.76
ARHGEF12-211ENST00000531616 GRIN2AQ12879 1464 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 GNALP38405 381 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 UBE4AQ14139 1066 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 RNF34Q969K3 372 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 GLI2P10070 1586 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 IQGAP2Q13576 1575 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 RASA1P20936 1047 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 PDILTQ8N807 584 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 TGIF2Q9GZN2 237 aa10.29□□□□□ -0.76
ARHGEF12-211ENST00000531616 FAM174AQ8TBP5 190 aa10.28□□□□□ -0.76
ARHGEF12-211ENST00000531616 PAGR1Q9BTK6 254 aa10.28□□□□□ -0.76
ARHGEF12-211ENST00000531616 CENPOQ9BU64 300 aa10.28□□□□□ -0.76
ARHGEF12-211ENST00000531616 EMILIN1Q9Y6C2 1016 aa10.28□□□□□ -0.76
ARHGEF12-211ENST00000531616 CLIP1P30622 1438 aa10.28□□□□□ -0.76
ARHGEF12-211ENST00000531616 EXOC5O00471 708 aa10.27□□□□□ -0.76
ARHGEF12-211ENST00000531616 LILRB3O75022 631 aa10.27□□□□□ -0.76
ARHGEF12-211ENST00000531616 ARID5AQ03989 594 aa10.27□□□□□ -0.76
ARHGEF12-211ENST00000531616 MRS2Q9HD23 443 aa10.27□□□□□ -0.76
ARHGEF12-211ENST00000531616 VTI1BQ9UEU0 232 aa10.27□□□□□ -0.76
ARHGEF12-211ENST00000531616 RAD54L2Q9Y4B4 1467 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 KIAA0556O60303 1618 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 HMGB1P1B2RPK0 211 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 RRM1P23921 792 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 GUCA2AQ02747 115 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 CXorf38Q8TB03 319 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 INO80BQ9C086 356 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 ANP32CO43423 234 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 PPP4R4Q6NUP7 873 aa10.27□□□□□ -0.77
ARHGEF12-211ENST00000531616 LRRIQ1Q96JM4 1722 aa10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 ZNF76P36508 570 aa10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 CDKN1CP49918 316 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 SKAP1Q86WV1 359 aa10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 ENOX1Q8TC92 643 aaKnown RBP10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 FANCLQ9NW38 375 aa10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 KIAA0586Q9BVV6 1533 aa10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 SALL2Q9Y467 1007 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-211ENST00000531616 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 CD53P19397 219 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 PTK7Q13308 1070 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 KANK3Q6NY19 840 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 PTPRHQ9HD43 1115 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 USP17L5A8MUK1 530 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 SKIP12755 728 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 TMC7Q7Z402 723 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 AS3MTQ9HBK9 375 aa10.25□□□□□ -0.77
ARHGEF12-211ENST00000531616 NRDCO43847 1150 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 NCOA4Q13772 614 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 SLC39A13Q96H72 371 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 SRPK1Q96SB4 655 aaKnown RBP10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 FAM163BP0C2L3 166 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 XPCQ01831 940 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 DPYDQ12882 1025 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 ZNF608Q9ULD9 1512 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 FAM221BA6H8Z2 402 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 ELOAQ14241 798 aaKnown RBP10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 LONRF1Q17RB8 773 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 C14orf80Q86SX3 495 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 NGDNQ8NEJ9 315 aaKnown RBP10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 SCYL1Q96KG9 808 aa10.24□□□□□ -0.77
ARHGEF12-211ENST00000531616 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 ICMTO60725 284 aa10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 PLPP6Q8IY26 295 aa10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 PAF1Q8N7H5 531 aa10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 FOSP01100 380 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 TOMM20Q15388 145 aa10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 FAM200AQ8TCP9 573 aa10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF12-211ENST00000531616 DALRD3Q5D0E6 543 aaKnown RBP10.22□□□□□ -0.77
ARHGEF12-211ENST00000531616 CCDC85AQ96PX6 553 aaPredicted RBP10.22□□□□□ -0.77
ARHGEF12-211ENST00000531616 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
ARHGEF12-211ENST00000531616 DSG3P32926 999 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms