RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 TEFQ10587 303 aa12.28□□□□□ -0.44
NXF1-209ENST00000531474 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.44
NXF1-209ENST00000531474 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
NXF1-209ENST00000531474 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
NXF1-209ENST00000531474 ADAMTS7Q9UKP4 1686 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 APBA3O96018 575 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 NFATC2IPQ8NCF5 419 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 PIGBQ92521 554 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 TNS1Q9HBL0 1735 aaKnown RBP12.27□□□□□ -0.45
NXF1-209ENST00000531474 CEMIPQ8WUJ3 1361 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 MRC1P22897 1456 aa12.27□□□□□ -0.45
NXF1-209ENST00000531474 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
NXF1-209ENST00000531474 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
NXF1-209ENST00000531474 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
NXF1-209ENST00000531474 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
NXF1-209ENST00000531474 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
NXF1-209ENST00000531474 BAG6P46379 1132 aa12.25□□□□□ -0.45
NXF1-209ENST00000531474 E9PSI1 815 aa12.24□□□□□ -0.45
NXF1-209ENST00000531474 BTAF1O14981 1849 aa12.24□□□□□ -0.45
NXF1-209ENST00000531474 DEFB132Q7Z7B7 95 aa12.24□□□□□ -0.45
NXF1-209ENST00000531474 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
NXF1-209ENST00000531474 DLG5Q8TDM6 1919 aa12.24□□□□□ -0.45
NXF1-209ENST00000531474 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
NXF1-209ENST00000531474 ITGB4P16144 1822 aa12.23□□□□□ -0.45
NXF1-209ENST00000531474 PALLDQ8WX93 1383 aa12.23□□□□□ -0.45
NXF1-209ENST00000531474 SOCS7O14512 581 aa12.23□□□□□ -0.45
NXF1-209ENST00000531474 EN1Q05925 392 aaPredicted RBP12.23□□□□□ -0.45
NXF1-209ENST00000531474 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
NXF1-209ENST00000531474 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
NXF1-209ENST00000531474 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
NXF1-209ENST00000531474 ASAP1Q9ULH1 1129 aa12.23□□□□□ -0.45
NXF1-209ENST00000531474 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
NXF1-209ENST00000531474 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
NXF1-209ENST00000531474 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
NXF1-209ENST00000531474 SLC39A6Q13433 755 aa12.22□□□□□ -0.45
NXF1-209ENST00000531474 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
NXF1-209ENST00000531474 WDR63Q8IWG1 891 aa12.22□□□□□ -0.45
NXF1-209ENST00000531474 TRMT2AQ8IZ69 625 aaKnown RBP12.22□□□□□ -0.45
NXF1-209ENST00000531474 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
NXF1-209ENST00000531474 WWC1Q8IX03 1113 aa12.21□□□□□ -0.45
NXF1-209ENST00000531474 TTC5Q8N0Z6 440 aa12.21□□□□□ -0.45
NXF1-209ENST00000531474 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.45
NXF1-209ENST00000531474 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
NXF1-209ENST00000531474 LAS1LQ9Y4W2 734 aaKnown RBP12.21□□□□□ -0.45
NXF1-209ENST00000531474 PLSCR1O15162 318 aa12.2□□□□□ -0.46
NXF1-209ENST00000531474 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
NXF1-209ENST00000531474 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
NXF1-209ENST00000531474 EZH2Q15910 746 aaKnown RBP12.2□□□□□ -0.46
NXF1-209ENST00000531474 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
NXF1-209ENST00000531474 CAMKK2Q96RR4 588 aa12.2□□□□□ -0.46
NXF1-209ENST00000531474 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
NXF1-209ENST00000531474 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
NXF1-209ENST00000531474 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
NXF1-209ENST00000531474 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
NXF1-209ENST00000531474 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
NXF1-209ENST00000531474 EP400Q96L91 3159 aa12.19□□□□□ -0.46
NXF1-209ENST00000531474 KCNQ3O43525 872 aa12.19□□□□□ -0.46
NXF1-209ENST00000531474 TXNRD1Q16881 649 aa12.19□□□□□ -0.46
NXF1-209ENST00000531474 ZNF790Q6PG37 636 aa12.19□□□□□ -0.46
NXF1-209ENST00000531474 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
NXF1-209ENST00000531474 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
NXF1-209ENST00000531474 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 KCNQ4P56696 695 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 SIK1P57059 783 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
NXF1-209ENST00000531474 GNAI1P63096 354 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 PROM2Q8N271 834 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
NXF1-209ENST00000531474 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 LY75O60449 1722 aa12.17□□□□□ -0.46
NXF1-209ENST00000531474 IL16Q14005 1332 aa12.16□□□□□ -0.46
NXF1-209ENST00000531474 CHL1O00533 1208 aa12.16□□□□□ -0.46
NXF1-209ENST00000531474 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
NXF1-209ENST00000531474 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
NXF1-209ENST00000531474 LRRC4BQ9NT99 713 aa12.16□□□□□ -0.46
NXF1-209ENST00000531474 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
NXF1-209ENST00000531474 ZNF853P0CG23 659 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 ITPK1Q13572 414 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
NXF1-209ENST00000531474 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 MYH16Q9H6N6 1097 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 RREB1Q92766 1687 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
NXF1-209ENST00000531474 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
NXF1-209ENST00000531474 UBR2Q8IWV8 1755 aa12.14□□□□□ -0.47
NXF1-209ENST00000531474 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
NXF1-209ENST00000531474 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
NXF1-209ENST00000531474 LINC00116Q8NCU8 138 aa12.13□□□□□ -0.47
NXF1-209ENST00000531474 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
NXF1-209ENST00000531474 FANCIQ9NVI1 1328 aa12.12□□□□□ -0.47
NXF1-209ENST00000531474 TJP1Q07157 1748 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms