RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
SF3B2-210ENST00000530981 ITPK1Q13572 414 aa12.25□□□□□ -0.45
SF3B2-210ENST00000530981 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
SF3B2-210ENST00000530981 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
SF3B2-210ENST00000530981 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
SF3B2-210ENST00000530981 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
SF3B2-210ENST00000530981 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
SF3B2-210ENST00000530981 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
SF3B2-210ENST00000530981 GNAT3A8MTJ3 354 aa12.24□□□□□ -0.45
SF3B2-210ENST00000530981 MRC1P22897 1456 aa12.24□□□□□ -0.45
SF3B2-210ENST00000530981 CABP4P57796 275 aa12.24□□□□□ -0.45
SF3B2-210ENST00000530981 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
SF3B2-210ENST00000530981 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
SF3B2-210ENST00000530981 SLC52A2Q9HAB3 445 aa12.24□□□□□ -0.45
SF3B2-210ENST00000530981 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
SF3B2-210ENST00000530981 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
SF3B2-210ENST00000530981 NFE2L2Q16236 605 aa12.22□□□□□ -0.45
SF3B2-210ENST00000530981 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
SF3B2-210ENST00000530981 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
SF3B2-210ENST00000530981 MIS18AQ9NYP9 233 aa12.22□□□□□ -0.45
SF3B2-210ENST00000530981 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-210ENST00000530981 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
SF3B2-210ENST00000530981 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
SF3B2-210ENST00000530981 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
SF3B2-210ENST00000530981 SIK1P57059 783 aa12.21□□□□□ -0.45
SF3B2-210ENST00000530981 MRS2Q9HD23 443 aa12.21□□□□□ -0.45
SF3B2-210ENST00000530981 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
SF3B2-210ENST00000530981 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.46
SF3B2-210ENST00000530981 MYH14Q7Z406 1995 aaKnown RBP12.2□□□□□ -0.46
SF3B2-210ENST00000530981 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
SF3B2-210ENST00000530981 SLC15A2Q16348 729 aa12.2□□□□□ -0.46
SF3B2-210ENST00000530981 C5P01031 1676 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 APAF1O14727 1248 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 RIPK4P57078 832 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■□□□□ 9.5
SF3B2-210ENST00000530981 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 MIER1Q8N108 512 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 RUNDC1Q96C34 613 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
SF3B2-210ENST00000530981 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 TJP1Q07157 1748 aa12.19□□□□□ -0.46
SF3B2-210ENST00000530981 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
SF3B2-210ENST00000530981 PRAMEF22A3QJZ6 481 aa12.18□□□□□ -0.46
SF3B2-210ENST00000530981 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
SF3B2-210ENST00000530981 SMARCC1Q92922 1105 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-210ENST00000530981 C4BP0C0L5 1744 aa12.17□□□□□ -0.46
SF3B2-210ENST00000530981 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-210ENST00000530981 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
SF3B2-210ENST00000530981 HTATSF1O43719 755 aaKnown RBP12.17□□□□□ -0.46
SF3B2-210ENST00000530981 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
SF3B2-210ENST00000530981 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-210ENST00000530981 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
SF3B2-210ENST00000530981 ZNF790Q6PG37 636 aa12.16□□□□□ -0.46
SF3B2-210ENST00000530981 DNAJC10Q8IXB1 793 aa12.16□□□□□ -0.46
SF3B2-210ENST00000530981 UBR3Q6ZT12 1888 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 TEFQ10587 303 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
SF3B2-210ENST00000530981 COL23A1Q86Y22 540 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-210ENST00000530981 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.46
SF3B2-210ENST00000530981 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-210ENST00000530981 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
SF3B2-210ENST00000530981 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
SF3B2-210ENST00000530981 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
SF3B2-210ENST00000530981 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
SF3B2-210ENST00000530981 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
SF3B2-210ENST00000530981 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
SF3B2-210ENST00000530981 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
SF3B2-210ENST00000530981 QSER1Q2KHR3 1735 aa12.12□□□□□ -0.47
SF3B2-210ENST00000530981 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
SF3B2-210ENST00000530981 USP16Q9Y5T5 823 aa12.12□□□□□ -0.47
SF3B2-210ENST00000530981 HEG1Q9ULI3 1381 aa12.11□□□□□ -0.47
SF3B2-210ENST00000530981 PTGER2P43116 358 aa12.11□□□□□ -0.47
SF3B2-210ENST00000530981 CRKLP46109 303 aaKnown RBP12.11□□□□□ -0.47
SF3B2-210ENST00000530981 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
SF3B2-210ENST00000530981 SGIP1Q9BQI5 828 aa12.11□□□□□ -0.47
SF3B2-210ENST00000530981 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
SF3B2-210ENST00000530981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
SF3B2-210ENST00000530981 CHL1O00533 1208 aa12.1□□□□□ -0.47
SF3B2-210ENST00000530981 GNPATO15228 680 aa12.1□□□□□ -0.47
SF3B2-210ENST00000530981 PHF14O94880 888 aa12.1□□□□□ -0.47
SF3B2-210ENST00000530981 NEFMP07197 916 aa12.1□□□□□ -0.47
SF3B2-210ENST00000530981 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
SF3B2-210ENST00000530981 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
SF3B2-210ENST00000530981 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-210ENST00000530981 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
SF3B2-210ENST00000530981 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 CCER2I3L3R5 266 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 A1BGP04217 495 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 ZNF853P0CG23 659 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
SF3B2-210ENST00000530981 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
SF3B2-210ENST00000530981 TTC5Q8N0Z6 440 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
SF3B2-210ENST00000530981 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms