RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 ARHGAP45Q92619 1136 aa9.29□□□□□ -0.92
BDNF-214ENST00000530786 SLC52A2Q9HAB3 445 aa9.29□□□□□ -0.92
BDNF-214ENST00000530786 PTPRCP08575 1304 aa9.29□□□□□ -0.92
BDNF-214ENST00000530786 SPATA31A6Q5VVP1 1343 aa9.29□□□□□ -0.92
BDNF-214ENST00000530786 GNAI3P08754 354 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 THRAP3Q9Y2W1 955 aaKnown RBP9.28□□□□□ -0.92
BDNF-214ENST00000530786 AKAP12Q02952 1782 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 RGS3P49796 1198 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 UNC5CLQ8IV45 518 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 HOXB7P09629 217 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 TSPYL6Q8N831 410 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
BDNF-214ENST00000530786 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
BDNF-214ENST00000530786 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
BDNF-214ENST00000530786 MYL6BP14649 208 aa9.27□□□□□ -0.92
BDNF-214ENST00000530786 ZNF790Q6PG37 636 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
BDNF-214ENST00000530786 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 TRIM27P14373 513 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 KIF6Q6ZMV9 814 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 SRCIN1Q9C0H9 1055 aa9.27□□□□□ -0.93
BDNF-214ENST00000530786 FLIIQ13045 1269 aa9.26□□□□□ -0.93
BDNF-214ENST00000530786 RGPD8O14715 1765 aaPredicted RBP9.26□□□□□ -0.93
BDNF-214ENST00000530786 CRB1P82279 1406 aa9.26□□□□□ -0.93
BDNF-214ENST00000530786 UBTFL1P0CB47 393 aaPredicted RBP9.26□□□□□ -0.93
BDNF-214ENST00000530786 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
BDNF-214ENST00000530786 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
BDNF-214ENST00000530786 TRPC5Q9UL62 973 aaPredicted RBP9.26□□□□□ -0.93
BDNF-214ENST00000530786 HSPA1LP34931 641 aa9.26□□□□□ -0.93
BDNF-214ENST00000530786 KRT24Q2M2I5 525 aa9.26□□□□□ -0.93
BDNF-214ENST00000530786 TMEM57Q8N5G2 664 aa9.26□□□□□ -0.93
BDNF-214ENST00000530786 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
BDNF-214ENST00000530786 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
BDNF-214ENST00000530786 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
BDNF-214ENST00000530786 PXDNQ92626 1479 aa9.25□□□□□ -0.93
BDNF-214ENST00000530786 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
BDNF-214ENST00000530786 EIF4A1P60842 406 aaKnown RBP9.24□□□□□ -0.93
BDNF-214ENST00000530786 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
BDNF-214ENST00000530786 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
BDNF-214ENST00000530786 APBB1O00213 710 aa9.24□□□□□ -0.93
BDNF-214ENST00000530786 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
BDNF-214ENST00000530786 STRCQ7RTU9 1775 aa9.24□□□□□ -0.93
BDNF-214ENST00000530786 GNAI2P04899 355 aa9.23□□□□□ -0.93
BDNF-214ENST00000530786 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
BDNF-214ENST00000530786 CYP27B1O15528 508 aa9.23□□□□□ -0.93
BDNF-214ENST00000530786 DNAAF4Q8WXU2 420 aa9.23□□□□□ -0.93
BDNF-214ENST00000530786 KAT6BQ8WYB5 2073 aa9.23□□□□□ -0.93
BDNF-214ENST00000530786 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
BDNF-214ENST00000530786 QTRT2Q9H974 415 aaKnown RBP9.23□□□□□ -0.93
BDNF-214ENST00000530786 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
BDNF-214ENST00000530786 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
BDNF-214ENST00000530786 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
BDNF-214ENST00000530786 IQSEC2Q5JU85 1478 aa9.22□□□□□ -0.93
BDNF-214ENST00000530786 SLIT3O75094 1523 aa9.22□□□□□ -0.93
BDNF-214ENST00000530786 ZNF772Q68DY9 489 aaPredicted RBP9.22□□□□□ -0.93
BDNF-214ENST00000530786 F6X3S4 739 aa9.22□□□□□ -0.93
BDNF-214ENST00000530786 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
BDNF-214ENST00000530786 ZNF496Q96IT1 587 aaPredicted RBP9.22□□□□□ -0.93
BDNF-214ENST00000530786 DDX21Q9NR30 783 aaKnown RBP eCLIP9.22□□□□□ -0.93
BDNF-214ENST00000530786 HSP90B1P14625 803 aaKnown RBP9.21□□□□□ -0.93
BDNF-214ENST00000530786 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.93
BDNF-214ENST00000530786 HSP90AB4PQ58FF6 505 aa9.21□□□□□ -0.93
BDNF-214ENST00000530786 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.93
BDNF-214ENST00000530786 PI4KAP2A4QPH2 592 aa9.21□□□□□ -0.93
BDNF-214ENST00000530786 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.93
BDNF-214ENST00000530786 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.93
BDNF-214ENST00000530786 RPAP2Q8IXW5 612 aaPredicted RBP9.21□□□□□ -0.93
BDNF-214ENST00000530786 PI4KAP1Q8N8J0 262 aa9.21□□□□□ -0.93
BDNF-214ENST00000530786 AFF2P51816 1311 aa9.21□□□□□ -0.94
BDNF-214ENST00000530786 VPS72Q15906 364 aa9.21□□□□□ -0.94
BDNF-214ENST00000530786 ANXA1P04083 346 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 NFAT5O94916 1531 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 MSH5O43196 834 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 KCNQ3O43525 872 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 HSP90AB3PQ58FF7 597 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 COPS6Q7L5N1 327 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 NRKQ7Z2Y5 1582 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 KSR2Q6VAB6 950 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 GCC1Q96CN9 775 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 C1orf115Q9H7X2 142 aa9.2□□□□□ -0.94
BDNF-214ENST00000530786 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
BDNF-214ENST00000530786 XAGE3Q8WTP9 111 aa9.19□□□□□ -0.94
BDNF-214ENST00000530786 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
BDNF-214ENST00000530786 GPATCH3Q96I76 525 aa9.19□□□□□ -0.94
BDNF-214ENST00000530786 ZNF652Q9Y2D9 606 aa9.19□□□□□ -0.94
BDNF-214ENST00000530786 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
BDNF-214ENST00000530786 MYD88Q99836 296 aa9.19□□□□□ -0.94
BDNF-214ENST00000530786 SPATA31A5Q5VU36 1347 aa9.18□□□□□ -0.94
BDNF-214ENST00000530786 SPATA31A7Q8IWB4 1347 aa9.18□□□□□ -0.94
BDNF-214ENST00000530786 G3BP1Q13283 466 aaKnown RBP eCLIP9.18□□□□□ -0.94
BDNF-214ENST00000530786 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
BDNF-214ENST00000530786 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms