RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 SYTL4Q96C24 671 aaPredicted RBP32.27■■■□□ 2.76
ME3-209ENST00000530520 ACSBG1Q96GR2 724 aa32.27■■■□□ 2.76
ME3-209ENST00000530520 E9PSI1 815 aa32.26■■■□□ 2.75
ME3-209ENST00000530520 CFAP44Q96MT7 982 aa32.26■■■□□ 2.75
ME3-209ENST00000530520 SPINK5Q9NQ38 1064 aaPredicted RBP32.26■■■□□ 2.75
ME3-209ENST00000530520 SBF2Q86WG5 1849 aa32.25■■■□□ 2.75
ME3-209ENST00000530520 BCL9O00512 1426 aa32.25■■■□□ 2.75
ME3-209ENST00000530520 TMOD3Q9NYL9 352 aa32.25■■■□□ 2.75
ME3-209ENST00000530520 PRIM1P49642 420 aaKnown RBP32.24■■■□□ 2.75
ME3-209ENST00000530520 SLFN5Q08AF3 891 aa32.24■■■□□ 2.75
ME3-209ENST00000530520 MYH16Q9H6N6 1097 aa32.24■■■□□ 2.75
ME3-209ENST00000530520 NHSQ6T4R5 1651 aa32.23■■■□□ 2.75
ME3-209ENST00000530520 ZNF853P0CG23 659 aa32.23■■■□□ 2.75
ME3-209ENST00000530520 MIS18AQ9NYP9 233 aa32.23■■■□□ 2.75
ME3-209ENST00000530520 KDM3BQ7LBC6 1761 aa32.23■■■□□ 2.75
ME3-209ENST00000530520 BTBD11A6QL63 1104 aa32.22■■■□□ 2.75
ME3-209ENST00000530520 FAM196AQ6ZSG2 479 aa32.22■■■□□ 2.75
ME3-209ENST00000530520 TSPYL4Q9UJ04 414 aa32.22■■■□□ 2.75
ME3-209ENST00000530520 CHL1O00533 1208 aa32.2■■■□□ 2.75
ME3-209ENST00000530520 TSR2Q969E8 191 aaKnown RBP32.2■■■□□ 2.75
ME3-209ENST00000530520 MBIPQ9NS73 344 aa32.2■■■□□ 2.75
ME3-209ENST00000530520 BABAM1Q9NWV8 329 aa32.19■■■□□ 2.74
ME3-209ENST00000530520 FANCIQ9NVI1 1328 aa32.19■■■□□ 2.74
ME3-209ENST00000530520 PIGBQ92521 554 aa32.19■■■□□ 2.74
ME3-209ENST00000530520 PAPPAQ13219 1627 aa32.17■■■□□ 2.74
ME3-209ENST00000530520 KCNQ2O43526 872 aa32.17■■■□□ 2.74
ME3-209ENST00000530520 SLC39A6Q13433 755 aa32.15■■■□□ 2.74
ME3-209ENST00000530520 DUSP27Q5VZP5 1158 aa32.15■■■□□ 2.74
ME3-209ENST00000530520 TRMT2AQ8IZ69 625 aaKnown RBP32.15■■■□□ 2.74
ME3-209ENST00000530520 BTAF1O14981 1849 aa32.14■■■□□ 2.74
ME3-209ENST00000530520 TTC5Q8N0Z6 440 aa32.14■■■□□ 2.74
ME3-209ENST00000530520 ZNF790Q6PG37 636 aa32.12■■■□□ 2.73
ME3-209ENST00000530520 KCNQ3O43525 872 aa32.11■■■□□ 2.73
ME3-209ENST00000530520 UBR2Q8IWV8 1755 aa32.11■■■□□ 2.73
ME3-209ENST00000530520 ASAP1Q9ULH1 1129 aa32.1■■■□□ 2.73
ME3-209ENST00000530520 EP400Q96L91 3159 aa32.1■■■□□ 2.73
ME3-209ENST00000530520 PTF1AQ7RTS3 328 aa32.09■■■□□ 2.73
ME3-209ENST00000530520 TRIM37O94972 964 aa32.08■■■□□ 2.73
ME3-209ENST00000530520 ATG3Q9NT62 314 aa32.08■■■□□ 2.73
ME3-209ENST00000530520 BCL11BQ9C0K0 894 aaPredicted RBP32.07■■■□□ 2.72
ME3-209ENST00000530520 EXOSC9Q06265 439 aaKnown RBP32.07■■■□□ 2.72
ME3-209ENST00000530520 EIF4A1P60842 406 aaKnown RBP32.06■■■□□ 2.72
ME3-209ENST00000530520 KCPQ6ZWJ8 1503 aa32.05■■■□□ 2.72
ME3-209ENST00000530520 KRT24Q2M2I5 525 aa32.03■■■□□ 2.72
ME3-209ENST00000530520 ZNF496Q96IT1 587 aaPredicted RBP32.03■■■□□ 2.72
ME3-209ENST00000530520 FMNL2Q96PY5 1086 aa32.03■■■□□ 2.72
ME3-209ENST00000530520 PTCD1O75127 700 aaKnown RBP32.02■■■□□ 2.72
ME3-209ENST00000530520 SMARCC1Q92922 1105 aaPredicted RBP32.02■■■□□ 2.72
ME3-209ENST00000530520 C8orf58Q8NAV2 365 aa32.02■■■□□ 2.72
ME3-209ENST00000530520 PALLDQ8WX93 1383 aa32.02■■■□□ 2.72
ME3-209ENST00000530520 ELL2O00472 640 aaPredicted RBP32.01■■■□□ 2.71
ME3-209ENST00000530520 RBM42Q9BTD8 480 aaKnown RBP32■■■□□ 2.71
ME3-209ENST00000530520 TNS1Q9HBL0 1735 aaKnown RBP32■■■□□ 2.71
ME3-209ENST00000530520 C5P01031 1676 aa31.99■■■□□ 2.71
ME3-209ENST00000530520 TWISTNBQ3B726 338 aaPredicted RBP31.99■■■□□ 2.71
ME3-209ENST00000530520 TSPYL6Q8N831 410 aa31.99■■■□□ 2.71
ME3-209ENST00000530520 HEG1Q9ULI3 1381 aa31.98■■■□□ 2.71
ME3-209ENST00000530520 CENPBP07199 599 aaPredicted RBP31.97■■■□□ 2.71
ME3-209ENST00000530520 LY75O60449 1722 aa31.96■■■□□ 2.71
ME3-209ENST00000530520 GIGYF1O75420 1035 aaPredicted RBP31.95■■■□□ 2.71
ME3-209ENST00000530520 LAMB4A4D0S4 1761 aa31.95■■■□□ 2.7
ME3-209ENST00000530520 SNRPA1P09661 255 aaKnown RBP31.94■■■□□ 2.7
ME3-209ENST00000530520 CT47B1P0C2W7 299 aaPredicted RBP31.93■■■□□ 2.7
ME3-209ENST00000530520 SOS1Q07889 1333 aaPredicted RBP31.92■■■□□ 2.7
ME3-209ENST00000530520 LOC102724428A0A0B4J2F2 783 aa31.92■■■□□ 2.7
ME3-209ENST00000530520 PRAMEF22A3QJZ6 481 aa31.92■■■□□ 2.7
ME3-209ENST00000530520 VAMP4O75379 141 aa31.92■■■□□ 2.7
ME3-209ENST00000530520 HOXB7P09629 217 aa31.92■■■□□ 2.7
ME3-209ENST00000530520 SIK1P57059 783 aa31.92■■■□□ 2.7
ME3-209ENST00000530520 APBA3O96018 575 aa31.91■■■□□ 2.7
ME3-209ENST00000530520 VSIG10Q8N0Z9 540 aa31.91■■■□□ 2.7
ME3-209ENST00000530520 TJP1Q07157 1748 aa31.91■■■□□ 2.7
ME3-209ENST00000530520 ZNF831Q5JPB2 1677 aa31.91■■■□□ 2.7
ME3-209ENST00000530520 SLC4A9Q96Q91 983 aa31.9■■■□□ 2.7
ME3-209ENST00000530520 ATP6V1AP38606 617 aa31.89■■■□□ 2.7
ME3-209ENST00000530520 CICQ96RK0 1608 aaPredicted RBP31.89■■■□□ 2.69
ME3-209ENST00000530520 EIF2S2P20042 333 aaKnown RBP31.88■■■□□ 2.69
ME3-209ENST00000530520 HDGFL1Q5TGJ6 251 aa31.87■■■□□ 2.69
ME3-209ENST00000530520 NECTIN2Q92692 538 aa31.87■■■□□ 2.69
ME3-209ENST00000530520 SF3B2Q13435 895 aaKnown RBP31.86■■■□□ 2.69
ME3-209ENST00000530520 DNAJC10Q8IXB1 793 aa31.86■■■□□ 2.69
ME3-209ENST00000530520 TEX13AQ9BXU3 409 aaPredicted RBP31.86■■■□□ 2.69
ME3-209ENST00000530520 ZNF428Q96B54 188 aa31.85■■■□□ 2.69
ME3-209ENST00000530520 CCNL1Q9UK58 526 aaPredicted RBP31.85■■■□□ 2.69
ME3-209ENST00000530520 RGPD3A6NKT7 1758 aaPredicted RBP31.85■■■□□ 2.69
ME3-209ENST00000530520 RGPD4Q7Z3J3 1758 aa31.85■■■□□ 2.69
ME3-209ENST00000530520 CHMP4AQ9BY43 222 aa31.85■■■□□ 2.69
ME3-209ENST00000530520 RCAN3Q9UKA8 241 aa31.85■■■□□ 2.69
ME3-209ENST00000530520 USP16Q9Y5T5 823 aa31.85■■■□□ 2.69
ME3-209ENST00000530520 CCDC30Q5VVM6 783 aa31.84■■■□□ 2.69
ME3-209ENST00000530520 PLSCR1O15162 318 aa31.83■■■□□ 2.69
ME3-209ENST00000530520 COL5A3P25940 1745 aaPredicted RBP31.83■■■□□ 2.69
ME3-209ENST00000530520 TCERG1O14776 1098 aaKnown RBP31.82■■■□□ 2.68
ME3-209ENST00000530520 TAF1LQ8IZX4 1826 aa31.82■■■□□ 2.68
ME3-209ENST00000530520 STARD3NLO95772 234 aa31.81■■■□□ 2.68
ME3-209ENST00000530520 KCNQ4P56696 695 aa31.81■■■□□ 2.68
ME3-209ENST00000530520 ITPK1Q13572 414 aa31.81■■■□□ 2.68
ME3-209ENST00000530520 RARSP54136 660 aaKnown RBP31.81■■■□□ 2.68
ME3-209ENST00000530520 BCL2L13Q9BXK5 485 aa31.8■■■□□ 2.68
ME3-209ENST00000530520 STK31Q9BXU1 1019 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms