RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 ZBTB7CA1YPR0 619 aa10.8□□□□□ -0.68
VPS26B-205ENST00000530402 WASLO00401 505 aaPredicted RBP10.8□□□□□ -0.68
VPS26B-205ENST00000530402 BRD1O95696 1058 aa10.8□□□□□ -0.68
VPS26B-205ENST00000530402 MEIOBQ8N635 442 aa10.8□□□□□ -0.68
VPS26B-205ENST00000530402 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
VPS26B-205ENST00000530402 TNS4Q8IZW8 715 aa10.79□□□□□ -0.68
VPS26B-205ENST00000530402 PRIMPOLQ96LW4 560 aa10.79□□□□□ -0.68
VPS26B-205ENST00000530402 TSEN34Q9BSV6 310 aaKnown RBP10.79□□□□□ -0.68
VPS26B-205ENST00000530402 IL2RAP01589 272 aa10.78□□□□□ -0.68
VPS26B-205ENST00000530402 TLR1Q15399 786 aa10.78□□□□□ -0.68
VPS26B-205ENST00000530402 KDF1Q8NAX2 398 aaPredicted RBP10.78□□□□□ -0.68
VPS26B-205ENST00000530402 XAGE2Q96GT9 111 aa10.78□□□□□ -0.68
VPS26B-205ENST00000530402 ESYT1Q9BSJ8 1104 aa10.78□□□□□ -0.68
VPS26B-205ENST00000530402 NRG2O14511 850 aaPredicted RBP10.77□□□□□ -0.69
VPS26B-205ENST00000530402 CLN3Q13286 438 aa10.77□□□□□ -0.69
VPS26B-205ENST00000530402 DGAT1O75907 488 aa10.76□□□□□ -0.69
VPS26B-205ENST00000530402 SMTNP53814 917 aa10.76□□□□□ -0.69
VPS26B-205ENST00000530402 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
VPS26B-205ENST00000530402 SLC4A9Q96Q91 983 aa10.76□□□□□ -0.69
VPS26B-205ENST00000530402 A6NJY4 79 aa10.75□□□□□ -0.69
VPS26B-205ENST00000530402 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
VPS26B-205ENST00000530402 BMP2P12643 396 aa10.75□□□□□ -0.69
VPS26B-205ENST00000530402 GTF2E1P29083 439 aaPredicted RBP10.75□□□□□ -0.69
VPS26B-205ENST00000530402 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
VPS26B-205ENST00000530402 C6orf118Q5T5N4 469 aa10.75□□□□□ -0.69
VPS26B-205ENST00000530402 SLAIN2Q9P270 581 aa10.75□□□□□ -0.69
VPS26B-205ENST00000530402 SSFA2P28290 1259 aa10.74□□□□□ -0.69
VPS26B-205ENST00000530402 CENPCQ03188 943 aa10.74□□□□□ -0.69
VPS26B-205ENST00000530402 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
VPS26B-205ENST00000530402 SCG3Q8WXD2 468 aaKnown RBP10.74□□□□□ -0.69
VPS26B-205ENST00000530402 POLMQ9NP87 494 aaPredicted RBP10.74□□□□□ -0.69
VPS26B-205ENST00000530402 AVPP01185 164 aa10.73□□□□□ -0.69
VPS26B-205ENST00000530402 KCNA1Q09470 495 aa10.73□□□□□ -0.69
VPS26B-205ENST00000530402 SCARF1Q14162 830 aa10.73□□□□□ -0.69
VPS26B-205ENST00000530402 LAPTM4AQ15012 233 aa10.73□□□□□ -0.69
VPS26B-205ENST00000530402 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
VPS26B-205ENST00000530402 TBCELQ5QJ74 424 aa10.73□□□□□ -0.69
VPS26B-205ENST00000530402 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
VPS26B-205ENST00000530402 TSPAN10Q9H1Z9 355 aaPredicted RBP10.73□□□□□ -0.69
VPS26B-205ENST00000530402 AXIN1O15169 862 aa10.72□□□□□ -0.69
VPS26B-205ENST00000530402 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
VPS26B-205ENST00000530402 MRPL14Q6P1L8 145 aaKnown RBP10.72□□□□□ -0.69
VPS26B-205ENST00000530402 SLC9A9Q8IVB4 645 aa10.72□□□□□ -0.69
VPS26B-205ENST00000530402 CXXC1Q9P0U4 656 aaPredicted RBP10.72□□□□□ -0.69
VPS26B-205ENST00000530402 SCHIP1Q9P0W5 487 aaPredicted RBP10.72□□□□□ -0.69
VPS26B-205ENST00000530402 ATAD2Q6PL18 1390 aa10.72□□□□□ -0.69
VPS26B-205ENST00000530402 PPP1R12BO60237 982 aaPredicted RBP10.71□□□□□ -0.69
VPS26B-205ENST00000530402 WEE1P30291 646 aa10.71□□□□□ -0.69
VPS26B-205ENST00000530402 OCLNQ16625 522 aa10.71□□□□□ -0.69
VPS26B-205ENST00000530402 TMEM214Q6NUQ4 689 aaKnown RBP10.71□□□□□ -0.69
VPS26B-205ENST00000530402 GAS2L2Q8NHY3 880 aa10.71□□□□□ -0.69
VPS26B-205ENST00000530402 VTI1AQ96AJ9 217 aa10.71□□□□□ -0.69
VPS26B-205ENST00000530402 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.69
VPS26B-205ENST00000530402 CHMP3Q9Y3E7 222 aa10.71□□□□□ -0.69
VPS26B-205ENST00000530402 CDK2AP1O14519 115 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 SPINT1O43278 529 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 BMP1P13497 986 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 IGFBP4P22692 258 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 EPHA4P54764 986 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 MTFR1Q15390 333 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
VPS26B-205ENST00000530402 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
VPS26B-205ENST00000530402 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
VPS26B-205ENST00000530402 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
VPS26B-205ENST00000530402 CCER1Q8TC90 406 aaPredicted RBP10.69□□□□□ -0.7
VPS26B-205ENST00000530402 MKNK1Q9BUB5 465 aa10.69□□□□□ -0.7
VPS26B-205ENST00000530402 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
VPS26B-205ENST00000530402 MTMR7Q9Y216 660 aa10.69□□□□□ -0.7
VPS26B-205ENST00000530402 HRH3Q9Y5N1 445 aa10.69□□□□□ -0.7
VPS26B-205ENST00000530402 GPC1P35052 558 aa10.68□□□□□ -0.7
VPS26B-205ENST00000530402 CTSOP43234 321 aaPredicted RBP10.68□□□□□ -0.7
VPS26B-205ENST00000530402 FOXK2Q01167 660 aa10.68□□□□□ -0.7
VPS26B-205ENST00000530402 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
VPS26B-205ENST00000530402 CABP1Q9NZU7 370 aa10.68□□□□□ -0.7
VPS26B-205ENST00000530402 FOXO3O43524 673 aa10.67□□□□□ -0.7
VPS26B-205ENST00000530402 SMCPP49901 116 aaPredicted RBP10.67□□□□□ -0.7
VPS26B-205ENST00000530402 RNF144AP50876 292 aaPredicted RBP10.67□□□□□ -0.7
VPS26B-205ENST00000530402 PSMA6P60900 246 aaKnown RBP10.67□□□□□ -0.7
VPS26B-205ENST00000530402 FKBP5Q13451 457 aaPredicted RBP10.67□□□□□ -0.7
VPS26B-205ENST00000530402 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
VPS26B-205ENST00000530402 ZNF232Q9UNY5 417 aa10.67□□□□□ -0.7
VPS26B-205ENST00000530402 IVNS1ABPQ9Y6Y0 642 aa10.67□□□□□ -0.7
VPS26B-205ENST00000530402 C21orf2O43822 256 aa10.66□□□□□ -0.7
VPS26B-205ENST00000530402 SCNN1AP37088 669 aa10.66□□□□□ -0.7
VPS26B-205ENST00000530402 C1orf216Q8TAB5 229 aa10.66□□□□□ -0.7
VPS26B-205ENST00000530402 PPARGC1BQ86YN6 1023 aaKnown RBP10.65□□□□□ -0.7
VPS26B-205ENST00000530402 NIFKQ9BYG3 293 aaKnown RBP10.65□□□□□ -0.7
VPS26B-205ENST00000530402 GRIP2Q9C0E4 1043 aa10.65□□□□□ -0.7
VPS26B-205ENST00000530402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.65□□□□□ -0.7
VPS26B-205ENST00000530402 IQSEC3Q9UPP2 1182 aaPredicted RBP10.65□□□□□ -0.7
VPS26B-205ENST00000530402 USP3Q9Y6I4 520 aa10.65□□□□□ -0.7
VPS26B-205ENST00000530402 SERTM1A2A2V5 107 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 TTLL8A6PVC2 850 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 ST8SIA5O15466 376 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 PTCD1O75127 700 aaKnown RBP10.64□□□□□ -0.71
VPS26B-205ENST00000530402 FOXD4L5Q5VV16 416 aaPredicted RBP10.64□□□□□ -0.71
VPS26B-205ENST00000530402 TAS1R3Q7RTX0 852 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 PRICKLE2Q7Z3G6 844 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 TRIM46Q7Z4K8 759 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 CRIPAKQ8N1N5 446 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms