RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
NCAPD3-208ENST00000530396 SLC27A3Q5K4L6 730 aa12.64□□□□□ -0.39
NCAPD3-208ENST00000530396 C20orf194Q5TEA3 1177 aa12.64□□□□□ -0.39
NCAPD3-208ENST00000530396 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
NCAPD3-208ENST00000530396 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
NCAPD3-208ENST00000530396 CHD4Q14839 1912 aa12.63□□□□□ -0.39
NCAPD3-208ENST00000530396 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 COG3Q96JB2 828 aa12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 CT47B1P0C2W7 299 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 MTHFSP49914 203 aa12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 LTV1Q96GA3 475 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-208ENST00000530396 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
NCAPD3-208ENST00000530396 HOXC9P31274 260 aa12.61□□□□□ -0.39
NCAPD3-208ENST00000530396 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
NCAPD3-208ENST00000530396 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
NCAPD3-208ENST00000530396 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
NCAPD3-208ENST00000530396 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
NCAPD3-208ENST00000530396 AMPHP49418 695 aa12.6□□□□□ -0.39
NCAPD3-208ENST00000530396 LY75O60449 1722 aa12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 POLD1P28340 1107 aa12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 SYTL4Q96C24 671 aaPredicted RBP12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
NCAPD3-208ENST00000530396 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
NCAPD3-208ENST00000530396 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
NCAPD3-208ENST00000530396 MEGF6O75095 1541 aa12.58□□□□□ -0.4
NCAPD3-208ENST00000530396 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.4
NCAPD3-208ENST00000530396 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
NCAPD3-208ENST00000530396 IL16Q14005 1332 aa12.57□□□□□ -0.4
NCAPD3-208ENST00000530396 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
NCAPD3-208ENST00000530396 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
NCAPD3-208ENST00000530396 FBLN1P23142 703 aa12.57□□□□□ -0.4
NCAPD3-208ENST00000530396 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
NCAPD3-208ENST00000530396 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
NCAPD3-208ENST00000530396 BCAR3O75815 825 aa12.56□□□□□ -0.4
NCAPD3-208ENST00000530396 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
NCAPD3-208ENST00000530396 GPR162Q16538 588 aa12.56□□□□□ -0.4
NCAPD3-208ENST00000530396 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
NCAPD3-208ENST00000530396 KCNQ4P56696 695 aa12.55□□□□□ -0.4
NCAPD3-208ENST00000530396 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
NCAPD3-208ENST00000530396 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 FYB1O15117 783 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 RRS1Q15050 365 aaKnown RBP12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 CLUAP1Q96AJ1 413 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
NCAPD3-208ENST00000530396 HMGB2P26583 209 aaKnown RBP12.53□□□□□ -0.4
NCAPD3-208ENST00000530396 GGNBP2Q9H3C7 697 aa12.53□□□□□ -0.4
NCAPD3-208ENST00000530396 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
NCAPD3-208ENST00000530396 GOLGB1Q14789 3259 aaKnown RBP12.53□□□□□ -0.4
NCAPD3-208ENST00000530396 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.4
NCAPD3-208ENST00000530396 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.4
NCAPD3-208ENST00000530396 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.4
NCAPD3-208ENST00000530396 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.4
NCAPD3-208ENST00000530396 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.41
NCAPD3-208ENST00000530396 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.41
NCAPD3-208ENST00000530396 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
NCAPD3-208ENST00000530396 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
NCAPD3-208ENST00000530396 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
NCAPD3-208ENST00000530396 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
NCAPD3-208ENST00000530396 FLT4P35916 1363 aa12.51□□□□□ -0.41
NCAPD3-208ENST00000530396 C5P01031 1676 aa12.51□□□□□ -0.41
NCAPD3-208ENST00000530396 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
NCAPD3-208ENST00000530396 C8orf34Q49A92 452 aa12.51□□□□□ -0.41
NCAPD3-208ENST00000530396 COL23A1Q86Y22 540 aaPredicted RBP12.51□□□□□ -0.41
NCAPD3-208ENST00000530396 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
NCAPD3-208ENST00000530396 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
NCAPD3-208ENST00000530396 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
NCAPD3-208ENST00000530396 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
NCAPD3-208ENST00000530396 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
NCAPD3-208ENST00000530396 PALLDQ8WX93 1383 aa12.49□□□□□ -0.41
NCAPD3-208ENST00000530396 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
NCAPD3-208ENST00000530396 FCHSD2O94868 740 aa12.48□□□□□ -0.41
NCAPD3-208ENST00000530396 ZNF428Q96B54 188 aa12.48□□□□□ -0.41
NCAPD3-208ENST00000530396 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
NCAPD3-208ENST00000530396 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
NCAPD3-208ENST00000530396 PKD1L3Q7Z443 1732 aa12.48□□□□□ -0.41
NCAPD3-208ENST00000530396 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 PANK1Q8TE04 598 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 TOGARAM1Q9Y4F4 1720 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 CYP27B1O15528 508 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 IGHDP01880 384 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.414e-7■■■□□ 15.4
NCAPD3-208ENST00000530396 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 MSL1Q68DK7 614 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 SMARCC1Q92922 1105 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms