RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
SVIP-204ENST00000530199 LMOD1P29536 600 aaPredicted RBP11.15□□□□□ -0.62
SVIP-204ENST00000530199 CTHP32929 405 aa11.15□□□□□ -0.62
SVIP-204ENST00000530199 COPS2P61201 443 aa11.15□□□□□ -0.62
SVIP-204ENST00000530199 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 LRP5O75197 1615 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 MMP16P51512 607 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 PDE4CQ08493 712 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
SVIP-204ENST00000530199 TBC1D9Q6ZT07 1266 aa11.13□□□□□ -0.63
SVIP-204ENST00000530199 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
SVIP-204ENST00000530199 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
SVIP-204ENST00000530199 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
SVIP-204ENST00000530199 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
SVIP-204ENST00000530199 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
SVIP-204ENST00000530199 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
SVIP-204ENST00000530199 PRDM9Q9NQV7 894 aa11.12□□□□□ -0.63
SVIP-204ENST00000530199 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
SVIP-204ENST00000530199 KIAA1107Q9UPP5 1409 aa11.11□□□□□ -0.63
SVIP-204ENST00000530199 KCNH2Q12809 1159 aa11.11□□□□□ -0.63
SVIP-204ENST00000530199 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
SVIP-204ENST00000530199 EP400Q96L91 3159 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 SYCP2Q9BX26 1530 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 ATP9BO43861 1147 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
SVIP-204ENST00000530199 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
SVIP-204ENST00000530199 FMN1Q68DA7 1419 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 ARHGAP23Q9P227 1491 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 ZPR1O75312 459 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 RANGAP1P46060 587 aaPredicted RBP11.09□□□□□ -0.63
SVIP-204ENST00000530199 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
SVIP-204ENST00000530199 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 ABCC3O15438 1527 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 AFF2P51816 1311 aa11.09□□□□□ -0.63
SVIP-204ENST00000530199 TLL1O43897 1013 aa11.08□□□□□ -0.64
SVIP-204ENST00000530199 ADH1BP00325 375 aa11.08□□□□□ -0.64
SVIP-204ENST00000530199 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
SVIP-204ENST00000530199 USTQ9Y2C2 406 aa11.08□□□□□ -0.64
SVIP-204ENST00000530199 SLIT1O75093 1534 aa11.08□□□□□ -0.64
SVIP-204ENST00000530199 PRDM15P57071 1507 aaPredicted RBP11.08□□□□□ -0.64
SVIP-204ENST00000530199 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
SVIP-204ENST00000530199 KCNA6P17658 529 aa11.07□□□□□ -0.64
SVIP-204ENST00000530199 LTKP29376 864 aa11.07□□□□□ -0.64
SVIP-204ENST00000530199 HNRNPMP52272 730 aaKnown RBP eCLIP11.07□□□□□ -0.64
SVIP-204ENST00000530199 PTK2Q05397 1052 aa11.07□□□□□ -0.64
SVIP-204ENST00000530199 NFATC2IPQ8NCF5 419 aa11.07□□□□□ -0.64
SVIP-204ENST00000530199 MTRQ99707 1265 aa11.07□□□□□ -0.64
SVIP-204ENST00000530199 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
SVIP-204ENST00000530199 MSH6P52701 1360 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
SVIP-204ENST00000530199 PIK3CDO00329 1044 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 ATG7O95352 703 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
SVIP-204ENST00000530199 POTEMA6NI47 508 aa11.05□□□□□ -0.64
SVIP-204ENST00000530199 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
SVIP-204ENST00000530199 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
SVIP-204ENST00000530199 QTRT2Q9H974 415 aaKnown RBP11.05□□□□□ -0.64
SVIP-204ENST00000530199 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
SVIP-204ENST00000530199 UBR1Q8IWV7 1749 aa11.04□□□□□ -0.64
SVIP-204ENST00000530199 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
SVIP-204ENST00000530199 RTEL1-TNFRSF6BF6WH68 1400 aa11.04□□□□□ -0.64
SVIP-204ENST00000530199 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
SVIP-204ENST00000530199 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
SVIP-204ENST00000530199 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
SVIP-204ENST00000530199 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
SVIP-204ENST00000530199 VRTNQ9H8Y1 702 aa11.03□□□□□ -0.64
SVIP-204ENST00000530199 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
SVIP-204ENST00000530199 NHSL1Q5SYE7 1610 aa11.02□□□□□ -0.64
SVIP-204ENST00000530199 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.65
SVIP-204ENST00000530199 UNC93B1Q9H1C4 597 aa11.02□□□□□ -0.65
SVIP-204ENST00000530199 IL21Q9HBE4 155 aa11.02□□□□□ -0.65
SVIP-204ENST00000530199 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
SVIP-204ENST00000530199 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
SVIP-204ENST00000530199 KIF3BO15066 747 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 SKIP12755 728 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 YY1P25490 414 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 PTCRAQ6ISU1 281 aaPredicted RBP11.01□□□□□ -0.65
SVIP-204ENST00000530199 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 FAM174AQ8TBP5 190 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 ZNF516Q92618 1163 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
SVIP-204ENST00000530199 PCDHB9Q9Y5E1 797 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
SVIP-204ENST00000530199 ERVK-7P63135 1459 aa11□□□□□ -0.65
SVIP-204ENST00000530199 USP17L3A6NCW0 530 aa11□□□□□ -0.65
SVIP-204ENST00000530199 USP17L4A6NCW7 530 aa11□□□□□ -0.65
SVIP-204ENST00000530199 USP17L5A8MUK1 530 aa11□□□□□ -0.65
SVIP-204ENST00000530199 PTPN5P54829 565 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms