RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CYLDQ9NQC7 956 aa10.24□□□□□ -0.77
CAPRIN1-208ENST00000530008 TMPRSS4Q9NRS4 437 aa10.24□□□□□ -0.77
CAPRIN1-208ENST00000530008 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 RNF223E7ERA6 249 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 INHAP05111 366 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 ARID5BQ14865 1188 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 EAPPQ56P03 285 aaPredicted RBP10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 TSPAN10Q9H1Z9 355 aaPredicted RBP10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 SERTAD1Q9UHV2 236 aa10.23□□□□□ -0.77
CAPRIN1-208ENST00000530008 FSHRP23945 695 aa10.22□□□□□ -0.77
CAPRIN1-208ENST00000530008 DHX9Q08211 1270 aaKnown RBP10.22□□□□□ -0.77
CAPRIN1-208ENST00000530008 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
CAPRIN1-208ENST00000530008 CDK15Q96Q40 435 aa10.22□□□□□ -0.77
CAPRIN1-208ENST00000530008 ETNK1Q9HBU6 452 aa10.22□□□□□ -0.77
CAPRIN1-208ENST00000530008 MPSTP25325 297 aa10.21□□□□□ -0.77
CAPRIN1-208ENST00000530008 ANKLE1Q8NAG6 615 aa10.21□□□□□ -0.77
CAPRIN1-208ENST00000530008 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
CAPRIN1-208ENST00000530008 SLC4A9Q96Q91 983 aa10.21□□□□□ -0.77
CAPRIN1-208ENST00000530008 RBCK1Q9BYM8 510 aa10.21□□□□□ -0.77
CAPRIN1-208ENST00000530008 GRM5P41594 1212 aa10.2□□□□□ -0.78
CAPRIN1-208ENST00000530008 C16orf46Q6P387 395 aa10.2□□□□□ -0.78
CAPRIN1-208ENST00000530008 TMC7Q7Z402 723 aa10.2□□□□□ -0.78
CAPRIN1-208ENST00000530008 ZNF784Q8NCA9 323 aaPredicted RBP10.2□□□□□ -0.78
CAPRIN1-208ENST00000530008 SAP130Q9H0E3 1048 aa10.2□□□□□ -0.78
CAPRIN1-208ENST00000530008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.2□□□□□ -0.78
CAPRIN1-208ENST00000530008 A0A1W2PRU2 124 aa10.19□□□□□ -0.78
CAPRIN1-208ENST00000530008 NDUFB5O43674 189 aa10.19□□□□□ -0.78
CAPRIN1-208ENST00000530008 PPP1R12BO60237 982 aaPredicted RBP10.19□□□□□ -0.78
CAPRIN1-208ENST00000530008 CYP2U1Q7Z449 544 aa10.19□□□□□ -0.78
CAPRIN1-208ENST00000530008 BCL11AQ9H165 835 aa10.19□□□□□ -0.78
CAPRIN1-208ENST00000530008 RECKO95980 971 aa10.18□□□□□ -0.78
CAPRIN1-208ENST00000530008 GNRH1P01148 92 aa10.18□□□□□ -0.78
CAPRIN1-208ENST00000530008 P4HBP07237 508 aaKnown RBP10.18□□□□□ -0.78
CAPRIN1-208ENST00000530008 RPIAP49247 311 aa10.18□□□□□ -0.78
CAPRIN1-208ENST00000530008 FOXK2Q01167 660 aa10.18□□□□□ -0.78
CAPRIN1-208ENST00000530008 LILRA1O75019 489 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 GGCXP38435 758 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 MYT1Q01538 1121 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 KCNC4Q03721 635 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 ESCO1Q5FWF5 840 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 RC3H1Q5TC82 1133 aaKnown RBP10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 SLC9A9Q8IVB4 645 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 STAG2Q8N3U4 1231 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 SCHIP1Q9P0W5 487 aaPredicted RBP10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
CAPRIN1-208ENST00000530008 TBCELQ5QJ74 424 aa10.16□□□□□ -0.78
CAPRIN1-208ENST00000530008 MPNDQ8N594 471 aa10.16□□□□□ -0.78
CAPRIN1-208ENST00000530008 C2orf49Q9BVC5 232 aaPredicted RBP10.16□□□□□ -0.78
CAPRIN1-208ENST00000530008 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
CAPRIN1-208ENST00000530008 A6NJY4 79 aa10.15□□□□□ -0.78
CAPRIN1-208ENST00000530008 TREHO43280 583 aa10.15□□□□□ -0.78
CAPRIN1-208ENST00000530008 SMTNP53814 917 aa10.15□□□□□ -0.78
CAPRIN1-208ENST00000530008 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
CAPRIN1-208ENST00000530008 CCDC116Q8IYX3 515 aa10.15□□□□□ -0.78
CAPRIN1-208ENST00000530008 CITED4Q96RK1 184 aa10.15□□□□□ -0.78
CAPRIN1-208ENST00000530008 TNFRSF10BO14763 440 aa10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 EIF1AXP47813 144 aaKnown RBP10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 FMR1Q06787 632 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 MTFR1Q15390 333 aa10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 COX20Q5RI15 118 aa10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 ALKBH2Q6NS38 261 aa10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 STIM2Q9P246 746 aa10.14□□□□□ -0.79
CAPRIN1-208ENST00000530008 FZD6O60353 706 aa10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 CD2BP2O95400 341 aaKnown RBP10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 ITGBL1O95965 494 aaPredicted RBP10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 ADH1CP00326 375 aa10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 TSNAXIP1Q2TAA8 658 aa10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 TMC1Q8TDI8 760 aa10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 C8orf37Q96NL8 207 aa10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 CCDC87Q9NVE4 849 aa10.13□□□□□ -0.79
CAPRIN1-208ENST00000530008 SIAH2O43255 324 aa10.12□□□□□ -0.79
CAPRIN1-208ENST00000530008 PSMA6P60900 246 aaKnown RBP10.12□□□□□ -0.79
CAPRIN1-208ENST00000530008 NR5A1Q13285 461 aa10.12□□□□□ -0.79
CAPRIN1-208ENST00000530008 AAMPQ13685 434 aa10.12□□□□□ -0.79
CAPRIN1-208ENST00000530008 QTRT2Q9H974 415 aaKnown RBP10.12□□□□□ -0.79
CAPRIN1-208ENST00000530008 RAB6BQ9NRW1 208 aa10.12□□□□□ -0.79
CAPRIN1-208ENST00000530008 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
CAPRIN1-208ENST00000530008 DSC3Q14574 896 aa10.11□□□□□ -0.79
CAPRIN1-208ENST00000530008 XAGE2Q96GT9 111 aa10.11□□□□□ -0.79
CAPRIN1-208ENST00000530008 PRKD2Q9BZL6 878 aa10.11□□□□□ -0.79
CAPRIN1-208ENST00000530008 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
CAPRIN1-208ENST00000530008 CDK2AP1O14519 115 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 IL2RAP01589 272 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 MYO19Q96H55 970 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 DMRTB1Q96MA1 342 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 PGPEP1Q9NXJ5 209 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 CHMP3Q9Y3E7 222 aa10.1□□□□□ -0.79
CAPRIN1-208ENST00000530008 NR3C2P08235 984 aa10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 PPP1R18Q6NYC8 613 aa10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 BACH2Q9BYV9 841 aa10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 IQSEC3Q9UPP2 1182 aaPredicted RBP10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 USP3Q9Y6I4 520 aa10.09□□□□□ -0.79
CAPRIN1-208ENST00000530008 IGHA2P01877 340 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms