RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 KIAA1024Q9UPX6 916 aa8.71□□□□□ -1.01
AMBRA1-209ENST00000529963 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 ZNF594Q96JF6 807 aaPredicted RBP8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 NRG2O14511 850 aaPredicted RBP8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
AMBRA1-209ENST00000529963 ABCC10Q5T3U5 1492 aa8.69□□□□□ -1.02
AMBRA1-209ENST00000529963 CAPN5O15484 640 aaPredicted RBP8.69□□□□□ -1.02
AMBRA1-209ENST00000529963 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
AMBRA1-209ENST00000529963 PSME1Q06323 249 aa8.69□□□□□ -1.02
AMBRA1-209ENST00000529963 DNAAF2Q9NVR5 837 aaKnown RBP8.69□□□□□ -1.02
AMBRA1-209ENST00000529963 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
AMBRA1-209ENST00000529963 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
AMBRA1-209ENST00000529963 LARP1Q6PKG0 1096 aaKnown RBP8.68□□□□□ -1.02
AMBRA1-209ENST00000529963 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
AMBRA1-209ENST00000529963 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
AMBRA1-209ENST00000529963 KIF27Q86VH2 1401 aa8.68□□□□□ -1.02
AMBRA1-209ENST00000529963 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L15C9J2P7 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L13C9JLJ4 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L11C9JVI0 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L21D6R901 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L18D6R9N7 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L22D6RA61 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L17D6RBQ6 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L19D6RCP7 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L20D6RJB6 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 RELBQ01201 579 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 USP17L24Q0WX57 530 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 KDF1Q8NAX2 398 aaPredicted RBP8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 IRX2Q9BZI1 471 aaPredicted RBP8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 ZNF395Q9H8N7 513 aaPredicted RBP8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 ADGRL1O94910 1474 aa8.67□□□□□ -1.02
AMBRA1-209ENST00000529963 PTK7Q13308 1070 aa8.66□□□□□ -1.02
AMBRA1-209ENST00000529963 Q6ZVU0 165 aa8.66□□□□□ -1.02
AMBRA1-209ENST00000529963 TRIM50Q86XT4 487 aa8.66□□□□□ -1.02
AMBRA1-209ENST00000529963 KIAA0586Q9BVV6 1533 aa8.66□□□□□ -1.02
AMBRA1-209ENST00000529963 IGF1RP08069 1367 aa8.66□□□□□ -1.02
AMBRA1-209ENST00000529963 ST8SIA5O15466 376 aa8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 LGR5O75473 907 aa8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 ADH1AP07327 375 aa8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 ARHGEF10LQ9HCE6 1279 aa8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 CUL7Q14999 1698 aa8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
AMBRA1-209ENST00000529963 MAPKBP1O60336 1514 aa8.65□□□□□ -1.03
AMBRA1-209ENST00000529963 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 DGAT1O75907 488 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 AVPP01185 164 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 BMP1P13497 986 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 FAM196BA6NMK8 535 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 ATG7O95352 703 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 SCNN1DP51172 638 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 DPYDQ12882 1025 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 CYP2U1Q7Z449 544 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 ETNK1Q9HBU6 452 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 DIP2BQ9P265 1576 aa8.64□□□□□ -1.03
AMBRA1-209ENST00000529963 DKK1O94907 266 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 GDF10P55107 478 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 ANKMY2Q8IV38 441 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 LARGE2Q8N3Y3 721 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 RETREG2Q8NC44 543 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 SERTAD1Q9UHV2 236 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 ADCY10Q96PN6 1610 aa8.63□□□□□ -1.03
AMBRA1-209ENST00000529963 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
AMBRA1-209ENST00000529963 MEN1O00255 615 aa8.62□□□□□ -1.03
AMBRA1-209ENST00000529963 DACH1Q9UI36 760 aa8.62□□□□□ -1.03
AMBRA1-209ENST00000529963 TSPOAP1O95153 1857 aa8.62□□□□□ -1.03
AMBRA1-209ENST00000529963 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
AMBRA1-209ENST00000529963 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
AMBRA1-209ENST00000529963 AXIN1O15169 862 aa8.61□□□□□ -1.03
AMBRA1-209ENST00000529963 PTGIRP43119 386 aa8.61□□□□□ -1.03
AMBRA1-209ENST00000529963 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
AMBRA1-209ENST00000529963 IL2RAP01589 272 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 LAPTM4AQ15012 233 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 SIX5Q8N196 739 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 PURBQ96QR8 312 aaKnown RBP8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 ZNF358Q9NW07 568 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 PTPRGP23470 1445 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 CARMIL2Q6F5E8 1435 aa8.6□□□□□ -1.03
AMBRA1-209ENST00000529963 GNRH1P01148 92 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 BMP2P12643 396 aa8.59□□□□□ -1.03
AMBRA1-209ENST00000529963 MRPL14Q6P1L8 145 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms