RNA–Protein interactions for RNA: ENST00000529950.1

MS4A4A-204, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 5

Gene MS4A4A, Length 658 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-204ENST00000529950 QSER1Q2KHR3 1735 aa17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 C5P01031 1676 aa17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
MS4A4A-204ENST00000529950 NFATC2IPQ8NCF5 419 aa17.25■□□□□ 0.35
MS4A4A-204ENST00000529950 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
MS4A4A-204ENST00000529950 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
MS4A4A-204ENST00000529950 ITPK1Q13572 414 aa17.23■□□□□ 0.35
MS4A4A-204ENST00000529950 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
MS4A4A-204ENST00000529950 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
MS4A4A-204ENST00000529950 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
MS4A4A-204ENST00000529950 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
MS4A4A-204ENST00000529950 PHF14O94880 888 aa17.22■□□□□ 0.35
MS4A4A-204ENST00000529950 LGR6Q9HBX8 967 aa17.22■□□□□ 0.35
MS4A4A-204ENST00000529950 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
MS4A4A-204ENST00000529950 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
MS4A4A-204ENST00000529950 GAS2L2Q8NHY3 880 aa17.21■□□□□ 0.35
MS4A4A-204ENST00000529950 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
MS4A4A-204ENST00000529950 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
MS4A4A-204ENST00000529950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 GNPATO15228 680 aa17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 SSFA2P28290 1259 aa17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
MS4A4A-204ENST00000529950 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
MS4A4A-204ENST00000529950 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
MS4A4A-204ENST00000529950 SMIM5Q71RC9 77 aa17.18■□□□□ 0.34
MS4A4A-204ENST00000529950 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
MS4A4A-204ENST00000529950 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
MS4A4A-204ENST00000529950 FCHSD2O94868 740 aa17.15■□□□□ 0.34
MS4A4A-204ENST00000529950 TEFQ10587 303 aa17.15■□□□□ 0.34
MS4A4A-204ENST00000529950 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
MS4A4A-204ENST00000529950 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
MS4A4A-204ENST00000529950 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
MS4A4A-204ENST00000529950 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
MS4A4A-204ENST00000529950 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
MS4A4A-204ENST00000529950 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
MS4A4A-204ENST00000529950 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 MRC1P22897 1456 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 NEFMP07197 916 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 RALBP1Q15311 655 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
MS4A4A-204ENST00000529950 ADRA2BP18089 450 aa17.12■□□□□ 0.33
MS4A4A-204ENST00000529950 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
MS4A4A-204ENST00000529950 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
MS4A4A-204ENST00000529950 RFC4P35249 363 aa17.11■□□□□ 0.33
MS4A4A-204ENST00000529950 DNAJC10Q8IXB1 793 aa17.11■□□□□ 0.33
MS4A4A-204ENST00000529950 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
MS4A4A-204ENST00000529950 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
MS4A4A-204ENST00000529950 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
MS4A4A-204ENST00000529950 GPR162Q16538 588 aa17.09■□□□□ 0.33
MS4A4A-204ENST00000529950 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 PNNQ9H307 717 aaKnown RBP17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
MS4A4A-204ENST00000529950 YY1P25490 414 aa17.07■□□□□ 0.32
MS4A4A-204ENST00000529950 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
MS4A4A-204ENST00000529950 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
MS4A4A-204ENST00000529950 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 MMP10P09238 476 aa17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 CYP19A1P11511 503 aaPredicted RBP17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 INTS5Q6P9B9 1019 aaKnown RBP17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 TJP1Q07157 1748 aa17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
MS4A4A-204ENST00000529950 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
MS4A4A-204ENST00000529950 HTATSF1O43719 755 aaKnown RBP17.05■□□□□ 0.32
MS4A4A-204ENST00000529950 MCM10Q7L590 875 aa17.05■□□□□ 0.32
MS4A4A-204ENST00000529950 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 STARD3NLO95772 234 aa17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 GYS1P13807 737 aa17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 FMNL2Q96PY5 1086 aa17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
MS4A4A-204ENST00000529950 ZPR1O75312 459 aa17.03■□□□□ 0.32
MS4A4A-204ENST00000529950 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
MS4A4A-204ENST00000529950 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
MS4A4A-204ENST00000529950 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
MS4A4A-204ENST00000529950 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.32
MS4A4A-204ENST00000529950 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.32
MS4A4A-204ENST00000529950 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.32
MS4A4A-204ENST00000529950 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
MS4A4A-204ENST00000529950 USP42Q9H9J4 1324 aaKnown RBP17.01■□□□□ 0.31
MS4A4A-204ENST00000529950 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
MS4A4A-204ENST00000529950 KCNQ3O43525 872 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms