RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
CCDC90B-214ENST00000529689 GUCY1B3Q02153 619 aa11.83□□□□□ -0.51
CCDC90B-214ENST00000529689 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 RBM25P49756 843 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 FILIP1Q7Z7B0 1213 aa11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 TNMDQ9H2S6 317 aa11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 TTC21BQ7Z4L5 1316 aa11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 PSMA5P28066 241 aa11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 KRT85P78386 507 aa11.83□□□□□ -0.52
CCDC90B-214ENST00000529689 INSRP06213 1382 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 HOMER1Q86YM7 354 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 PES1O00541 588 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 IL13P35225 146 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 ANTXR1Q9H6X2 564 aa11.82□□□□□ -0.52
CCDC90B-214ENST00000529689 TPD52L1Q16890 204 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 PTPRCP08575 1304 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 ERVK-7P63135 1459 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 CCDC192P0DO97 292 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 TPM4P67936 248 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 RBSNQ9H1K0 784 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 ATP10AO60312 1499 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 GLRX3O76003 335 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 FKBP4Q02790 459 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
CCDC90B-214ENST00000529689 ME1P48163 572 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 EVA1CP58658 441 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 CHMP4CQ96CF2 233 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 PNMA6EA0A0J9YXQ4 647 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 PDCP20941 246 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 EYA1Q99502 592 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 CDK11BP21127 795 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
CCDC90B-214ENST00000529689 RRP9O43818 475 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 SYNE3Q6ZMZ3 975 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 ZNF771Q7L3S4 317 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 RALYLQ86SE5 291 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 MSH6P52701 1360 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 STX6O43752 255 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 KINO60870 393 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 GJB2P29033 226 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 ADCY5O95622 1261 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 LRRC59Q96AG4 307 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 KDM5DQ9BY66 1539 aa11.79□□□□□ -0.52
CCDC90B-214ENST00000529689 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 MAST1Q9Y2H9 1570 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 GTF2E1P29083 439 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 TRDNQ13061 729 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 MYD88Q99836 296 aa11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-214ENST00000529689 SMC2O95347 1197 aa11.77□□□□□ -0.52
CCDC90B-214ENST00000529689 CCT2P78371 535 aaKnown RBP11.77□□□□□ -0.52
CCDC90B-214ENST00000529689 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.52
CCDC90B-214ENST00000529689 STRN4Q9NRL3 753 aa11.77□□□□□ -0.52
CCDC90B-214ENST00000529689 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 RRP12Q5JTH9 1297 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 MTMR7Q9Y216 660 aa11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 ADGBQ8N7X0 1667 aa11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-214ENST00000529689 CHMLP26374 656 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 ATP8B2P98198 1209 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 C17orf53Q8N3J3 647 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 PKNOX2Q96KN3 472 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 ECHDC1Q9NTX5 307 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 CBX1P83916 185 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 NPATQ14207 1427 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 CCDC183Q5T5S1 534 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 CPLX2Q6PUV4 134 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 PALD1Q9ULE6 856 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms