RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
TGFBR3-208ENST00000529608 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-208ENST00000529608 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-208ENST00000529608 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
TGFBR3-208ENST00000529608 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
TGFBR3-208ENST00000529608 USP47Q96K76 1375 aa12.01□□□□□ -0.49
TGFBR3-208ENST00000529608 NUBP1P53384 320 aa12□□□□□ -0.49
TGFBR3-208ENST00000529608 HSP90AB2PQ58FF8 381 aa12□□□□□ -0.49
TGFBR3-208ENST00000529608 RASEFQ8IZ41 740 aa12□□□□□ -0.49
TGFBR3-208ENST00000529608 CYP27B1O15528 508 aa11.99□□□□□ -0.49
TGFBR3-208ENST00000529608 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
TGFBR3-208ENST00000529608 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
TGFBR3-208ENST00000529608 ANKRD26Q9UPS8 1709 aa11.98□□□□□ -0.49
TGFBR3-208ENST00000529608 ATP10DQ9P241 1426 aa11.98□□□□□ -0.49
TGFBR3-208ENST00000529608 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
TGFBR3-208ENST00000529608 INSRP06213 1382 aa11.97□□□□□ -0.49
TGFBR3-208ENST00000529608 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
TGFBR3-208ENST00000529608 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
TGFBR3-208ENST00000529608 ADCY9O60503 1353 aa11.96□□□□□ -0.49
TGFBR3-208ENST00000529608 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
TGFBR3-208ENST00000529608 TATP17735 454 aaPredicted RBP11.96□□□□□ -0.49
TGFBR3-208ENST00000529608 RAPGEF4Q8WZA2 1011 aa11.96□□□□□ -0.49
TGFBR3-208ENST00000529608 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
TGFBR3-208ENST00000529608 WWC3Q9ULE0 1092 aa11.96□□□□□ -0.49
TGFBR3-208ENST00000529608 NCAPD2Q15021 1401 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 PCDH11XQ9BZA7 1347 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 PCDH11YQ9BZA8 1340 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 CARD14Q9BXL6 1004 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 CEP350Q5VT06 3117 aa11.95□□□□□ -0.5
TGFBR3-208ENST00000529608 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
TGFBR3-208ENST00000529608 FLT4P35916 1363 aa11.94□□□□□ -0.5
TGFBR3-208ENST00000529608 GABBR2O75899 941 aa11.94□□□□□ -0.5
TGFBR3-208ENST00000529608 CD2APQ9Y5K6 639 aa11.94□□□□□ -0.5
TGFBR3-208ENST00000529608 PHF14O94880 888 aa11.93□□□□□ -0.5
TGFBR3-208ENST00000529608 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
TGFBR3-208ENST00000529608 PIGBQ92521 554 aa11.93□□□□□ -0.5
TGFBR3-208ENST00000529608 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-208ENST00000529608 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-208ENST00000529608 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
TGFBR3-208ENST00000529608 KIF13BQ9NQT8 1826 aa11.92□□□□□ -0.5
TGFBR3-208ENST00000529608 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
TGFBR3-208ENST00000529608 IGSF1Q8N6C5 1336 aa11.91□□□□□ -0.5
TGFBR3-208ENST00000529608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
TGFBR3-208ENST00000529608 TMF1P82094 1093 aa11.91□□□□□ -0.5
TGFBR3-208ENST00000529608 ITPK1Q13572 414 aa11.91□□□□□ -0.5
TGFBR3-208ENST00000529608 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
TGFBR3-208ENST00000529608 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
TGFBR3-208ENST00000529608 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
TGFBR3-208ENST00000529608 COL5A3P25940 1745 aaPredicted RBP11.9□□□□□ -0.5
TGFBR3-208ENST00000529608 FLAD1Q8NFF5 587 aa11.9□□□□□ -0.5
TGFBR3-208ENST00000529608 AK7Q96M32 723 aa11.9□□□□□ -0.5
TGFBR3-208ENST00000529608 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
TGFBR3-208ENST00000529608 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
TGFBR3-208ENST00000529608 EYA1Q99502 592 aa11.89□□□□□ -0.51
TGFBR3-208ENST00000529608 GPBP1L1Q9HC44 474 aaPredicted RBP11.89□□□□□ -0.51
TGFBR3-208ENST00000529608 ASAP1Q9ULH1 1129 aa11.89□□□□□ -0.51
TGFBR3-208ENST00000529608 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 SIK1P57059 783 aa11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 SMARCC1Q92922 1105 aaPredicted RBP11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
TGFBR3-208ENST00000529608 KIF3CO14782 793 aa11.87□□□□□ -0.51
TGFBR3-208ENST00000529608 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
TGFBR3-208ENST00000529608 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
TGFBR3-208ENST00000529608 SSFA2P28290 1259 aa11.87□□□□□ -0.51
TGFBR3-208ENST00000529608 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
TGFBR3-208ENST00000529608 KDRP35968 1356 aa11.87□□□□□ -0.51
TGFBR3-208ENST00000529608 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 GNPATO15228 680 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 PHKG2P15735 406 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 HSPA6P17066 643 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 CLCN6P51797 869 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 FAM212AQ96EL1 285 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-208ENST00000529608 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
TGFBR3-208ENST00000529608 TMOD3Q9NYL9 352 aa11.85□□□□□ -0.51
TGFBR3-208ENST00000529608 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
TGFBR3-208ENST00000529608 SPG7Q9UQ90 795 aa11.85□□□□□ -0.51
TGFBR3-208ENST00000529608 MMP10P09238 476 aa11.84□□□□□ -0.51
TGFBR3-208ENST00000529608 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
TGFBR3-208ENST00000529608 EIF4A2Q14240 407 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-208ENST00000529608 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
TGFBR3-208ENST00000529608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
TGFBR3-208ENST00000529608 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-208ENST00000529608 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
TGFBR3-208ENST00000529608 TJP1Q07157 1748 aa11.83□□□□□ -0.52
TGFBR3-208ENST00000529608 ADAMTS7Q9UKP4 1686 aa11.82□□□□□ -0.52
TGFBR3-208ENST00000529608 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
TGFBR3-208ENST00000529608 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-208ENST00000529608 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
TGFBR3-208ENST00000529608 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-208ENST00000529608 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-208ENST00000529608 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
TGFBR3-208ENST00000529608 GYS1P13807 737 aa11.8□□□□□ -0.52
TGFBR3-208ENST00000529608 KCNA3P22001 575 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms