RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 TRIM29Q14134 588 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 EYA1Q99502 592 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 SYNMO15061 1565 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 ATP7BP35670 1465 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 FAM83GA6ND36 823 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 AEBP1Q8IUX7 1158 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 SMC3Q9UQE7 1217 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 AKAP2Q9Y2D5 859 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 NPHP4O75161 1426 aaPredicted RBP5.64□□□□□ -1.51
CASP4-207ENST00000529565 FAM177BA6PVY3 158 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 UBAP1LF5GYI3 381 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 IL13P35225 146 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 AACSQ86V21 672 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 DNAJC2Q99543 621 aaKnown RBP5.64□□□□□ -1.51
CASP4-207ENST00000529565 IL2RBP14784 551 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 MTHFSDQ2M296 383 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 GLRX3O76003 335 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 IGHMBP2P38935 993 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 DNTTIP2Q5QJE6 756 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 C20orf194Q5TEA3 1177 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 MYD88Q99836 296 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 CDCA7Q9BWT1 371 aaPredicted RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 METP08581 1390 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 RNF17Q9BXT8 1623 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 A0A087WZG4 1122 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 SART3Q15020 963 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 SMARCC1Q92922 1105 aaPredicted RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 DCAF5Q96JK2 942 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 SIL1Q9H173 461 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 ALDH1L1O75891 902 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 SLC3A2P08195 630 aaKnown RBP5.63□□□□□ -1.51
CASP4-207ENST00000529565 NFXL1Q6ZNB6 911 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 MAP3K4Q9Y6R4 1608 aa5.63□□□□□ -1.51
CASP4-207ENST00000529565 AATKQ6ZMQ8 1374 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 SPHKAPQ2M3C7 1700 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 LMTK3Q96Q04 1460 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 DRC7Q8IY82 874 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 CLTCL1P53675 1640 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 F6X3S4 739 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 ZPR1O75312 459 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 HOXB7P09629 217 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 MX1P20591 662 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 SLC4A3P48751 1232 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 HDAC1Q13547 482 aaPredicted RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 ANKRD1Q15327 319 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 MRPL50Q8N5N7 158 aaKnown RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 GZF1Q9H116 711 aaPredicted RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 DDX49Q9Y6V7 483 aaKnown RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 BLMP54132 1417 aaPredicted RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 PDCP20941 246 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 RASSF8Q8NHQ8 419 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 ORAI2Q96SN7 254 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 NACAP1Q9BZK3 213 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 ZMYM4Q5VZL5 1548 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 INO80Q9ULG1 1556 aaPredicted RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 MSNP26038 577 aaKnown RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 SAFBQ15424 915 aaKnown RBP eCLIP5.62□□□□□ -1.51
CASP4-207ENST00000529565 FBXW7Q969H0 707 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 CWC25Q9NXE8 425 aaPredicted RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 CTNNA3Q9UI47 895 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 EXOC6BQ9Y2D4 811 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 MAP3K2Q9Y2U5 619 aa5.62□□□□□ -1.51
CASP4-207ENST00000529565 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
CASP4-207ENST00000529565 RIMBP3CA6NJZ7 1639 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 RIMBP3BA6NNM3 1639 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 RIMBP3Q9UFD9 1639 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 A2ML1A8K2U0 1454 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 GLI2P10070 1586 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 PI4KAP2A4QPH2 592 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 DHX16O60231 1041 aaKnown RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 VAMP4O75379 141 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 DEKP35659 375 aaKnown RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 NEK4P51957 841 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 PI4KAP1Q8N8J0 262 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 IL27Q8NEV9 243 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 PHACTR3Q96KR7 559 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 LRRIQ1Q96JM4 1722 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 MARCH6O60337 910 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 IFIT5Q13325 482 aaKnown RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 KRT32Q14532 448 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 MCTP1Q6DN14 999 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 ANKRD13DQ6ZTN6 518 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 C8orf58Q8NAV2 365 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 ANO8Q9HCE9 1232 aaPredicted RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 IL1RAPL2Q9NP60 686 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 SLAIN2Q9P270 581 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 AGLP35573 1532 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 RNMTO43148 476 aaKnown RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 PDIA4P13667 645 aaKnown RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 DDB1Q16531 1140 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 CWC22Q9HCG8 908 aaKnown RBP5.61□□□□□ -1.51
CASP4-207ENST00000529565 CYP46A1Q9Y6A2 500 aa5.61□□□□□ -1.51
CASP4-207ENST00000529565 KIF24Q5T7B8 1368 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 IFIT1P09914 478 aaKnown RBP5.6□□□□□ -1.51
CASP4-207ENST00000529565 XBP1P17861 261 aa5.6□□□□□ -1.51
CASP4-207ENST00000529565 CHAF1AQ13111 956 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms