RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 TRIM22Q8IYM9 498 aa3.78□□□□□ -1.8
FDFT1-216ENST00000529521 CABLES1Q8TDN4 633 aa3.78□□□□□ -1.8
FDFT1-216ENST00000529521 KCTD15Q96SI1 283 aaPredicted RBP3.78□□□□□ -1.8
FDFT1-216ENST00000529521 GZF1Q9H116 711 aaPredicted RBP3.78□□□□□ -1.8
FDFT1-216ENST00000529521 CHMP4BQ9H444 224 aaKnown RBP3.78□□□□□ -1.8
FDFT1-216ENST00000529521 LYSMD3Q7Z3D4 306 aa3.77□□□□□ -1.81
FDFT1-216ENST00000529521 ALYREFQ86V81 257 aaKnown RBP3.77□□□□□ -1.81
FDFT1-216ENST00000529521 PARP9Q8IXQ6 854 aa3.77□□□□□ -1.81
FDFT1-216ENST00000529521 KDF1Q8NAX2 398 aaPredicted RBP3.77□□□□□ -1.81
FDFT1-216ENST00000529521 GMCL1Q96IK5 515 aa3.77□□□□□ -1.81
FDFT1-216ENST00000529521 TBC1D2Q9BYX2 928 aa3.77□□□□□ -1.81
FDFT1-216ENST00000529521 ZBTB3Q9H5J0 574 aa3.77□□□□□ -1.81
FDFT1-216ENST00000529521 BTBD11A6QL63 1104 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 SHISA8B8ZZ34 492 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 RHOQP17081 205 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 DHX9Q08211 1270 aaKnown RBP3.76□□□□□ -1.81
FDFT1-216ENST00000529521 INTS6LQ5JSJ4 861 aaKnown RBP3.76□□□□□ -1.81
FDFT1-216ENST00000529521 ZMYM1Q5SVZ6 1142 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 PRPF38BQ5VTL8 546 aaKnown RBP3.76□□□□□ -1.81
FDFT1-216ENST00000529521 FOXR1Q6PIV2 292 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 GIGYF2Q6Y7W6 1299 aaKnown RBP3.76□□□□□ -1.81
FDFT1-216ENST00000529521 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 GTPBP3Q969Y2 492 aaKnown RBP3.76□□□□□ -1.81
FDFT1-216ENST00000529521 DDRGK1Q96HY6 314 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 BEGAINQ9BUH8 593 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 FAM117AQ9C073 453 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 MKL2Q9ULH7 1088 aa3.76□□□□□ -1.81
FDFT1-216ENST00000529521 PLEKHD1A6NEE1 506 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 C1QTNF9BB2RNN3 333 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 ADH1AP07327 375 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 MX2P20592 715 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 FAM193AP78312 1265 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 FAM50AQ14320 339 aaKnown RBP3.75□□□□□ -1.81
FDFT1-216ENST00000529521 C1orf229Q6ZS94 237 aaPredicted RBP3.75□□□□□ -1.81
FDFT1-216ENST00000529521 PRICKLE2Q7Z3G6 844 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 CD163Q86VB7 1156 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 TMTC2Q8N394 836 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 TSC1Q92574 1164 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 SEMA6BQ9H3T3 888 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 SUV39H2Q9H5I1 410 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 ATP1B4Q9UN42 357 aaPredicted RBP3.75□□□□□ -1.81
FDFT1-216ENST00000529521 RIPOR2Q9Y4F9 1068 aa3.75□□□□□ -1.81
FDFT1-216ENST00000529521 LILRA1O75019 489 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 HOXB4P17483 251 aaPredicted RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 GTF2E1P29083 439 aaPredicted RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 ADD1P35611 737 aaKnown RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 PTGIRP43119 386 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 OS9Q13438 667 aaPredicted RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 GRIN2CQ14957 1233 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 CSPP1Q1MSJ5 1256 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 FOXD4L6Q3SYB3 417 aaPredicted RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 FOXD4L3Q6VB84 417 aaPredicted RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 RIPOR1Q6ZS17 1223 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 GPKOWQ92917 476 aaPredicted RBP eCLIP3.74□□□□□ -1.816e-8■■■■□ 22.1
FDFT1-216ENST00000529521 SLC10A4Q96EP9 437 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 OXCT2Q9BYC2 517 aaPredicted RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 TMPRSS4Q9NRS4 437 aa3.74□□□□□ -1.81
FDFT1-216ENST00000529521 LAS1LQ9Y4W2 734 aaKnown RBP3.74□□□□□ -1.81
FDFT1-216ENST00000529521 CANXP27824 592 aaKnown RBP3.73□□□□□ -1.81
FDFT1-216ENST00000529521 CHRNA4P43681 627 aa3.73□□□□□ -1.81
FDFT1-216ENST00000529521 RNF144AP50876 292 aaPredicted RBP3.73□□□□□ -1.81
FDFT1-216ENST00000529521 QPCTQ16769 361 aa3.73□□□□□ -1.81
FDFT1-216ENST00000529521 LINC00114Q6XXX2 140 aa3.73□□□□□ -1.81
FDFT1-216ENST00000529521 RIC3Q7Z5B4 369 aa3.73□□□□□ -1.81
FDFT1-216ENST00000529521 CCDC82Q8N4S0 544 aa3.73□□□□□ -1.81
FDFT1-216ENST00000529521 ZNF784Q8NCA9 323 aaPredicted RBP3.73□□□□□ -1.81
FDFT1-216ENST00000529521 RRAGCQ9HB90 399 aa3.73□□□□□ -1.81
FDFT1-216ENST00000529521 CDV3Q9UKY7 258 aaKnown RBP3.73□□□□□ -1.81
FDFT1-216ENST00000529521 NSFL1CQ9UNZ2 370 aaKnown RBP3.73□□□□□ -1.81
FDFT1-216ENST00000529521 BRD1O95696 1058 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 DOC2BQ14184 412 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 DIXDC1Q155Q3 683 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 PDXDC2PQ6P474 469 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 NOL8Q76FK4 1167 aaKnown RBP3.72□□□□□ -1.81
FDFT1-216ENST00000529521 ZNF622Q969S3 477 aaKnown RBP eCLIP3.72□□□□□ -1.812e-27■□□□□ 8.3
FDFT1-216ENST00000529521 SGSM3Q96HU1 749 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 TRERF1Q96PN7 1200 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 ARHGAP9Q9BRR9 750 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 DYRK1BQ9Y463 629 aa3.72□□□□□ -1.81
FDFT1-216ENST00000529521 H7C1W4 665 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 CLGNO14967 610 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 MAP2K3P46734 347 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 RTL5Q5HYW3 569 aaPredicted RBP3.71□□□□□ -1.82
FDFT1-216ENST00000529521 SPTY2D1Q68D10 685 aaPredicted RBP3.71□□□□□ -1.82
FDFT1-216ENST00000529521 ANKRD13AQ8IZ07 590 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 FAM9BQ8IZU0 186 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 PCMTD1Q96MG8 357 aaPredicted RBP3.71□□□□□ -1.82
FDFT1-216ENST00000529521 GAS2L1Q99501 681 aaPredicted RBP3.71□□□□□ -1.82
FDFT1-216ENST00000529521 OCSTAMPQ9BR26 566 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 LIMD1Q9UGP4 676 aa3.71□□□□□ -1.82
FDFT1-216ENST00000529521 SCO2A0A1W2PP80 73 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 NUTM2BA6NNL0 878 aaPredicted RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 NUTM2EB1AL46 878 aaPredicted RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 ERVH48-1M5A8F1 160 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 SMARCA5O60264 1052 aaPredicted RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 LILRB3O75022 631 aa3.7□□□□□ -1.82
FDFT1-216ENST00000529521 CNGB1Q14028 1251 aaPredicted RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 NUTM2DQ5VT03 806 aaPredicted RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 NUTM2AQ8IVF1 878 aaPredicted RBP3.7□□□□□ -1.82
FDFT1-216ENST00000529521 EDARADDQ8WWZ3 215 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms