RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 KIAA2012Q0VF49 1180 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 NRAPQ86VF7 1730 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 RREB1Q92766 1687 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 SPDYE4A6NLX3 237 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 MPHOSPH9Q99550 1183 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 C22orf23Q9BZE7 217 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 ABCA3Q99758 1704 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 ROBO2Q9HCK4 1378 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 KIF1AQ12756 1690 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 HSCBQ8IWL3 235 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 MPNDQ8N594 471 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 RBSNQ9H1K0 784 aa9.81□□□□□ -0.84
C11orf88-203ENST00000529167 ADGRB2O60241 1585 aa9.8□□□□□ -0.84
C11orf88-203ENST00000529167 NPC1L1Q9UHC9 1359 aa9.8□□□□□ -0.84
C11orf88-203ENST00000529167 EGFL6Q8IUX8 553 aa9.8□□□□□ -0.84
C11orf88-203ENST00000529167 JARID2Q92833 1246 aaPredicted RBP9.8□□□□□ -0.84
C11orf88-203ENST00000529167 PRDM16Q9HAZ2 1276 aa9.8□□□□□ -0.84
C11orf88-203ENST00000529167 CALCOCO1Q9P1Z2 691 aa9.8□□□□□ -0.84
C11orf88-203ENST00000529167 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
C11orf88-203ENST00000529167 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
C11orf88-203ENST00000529167 CGNL1Q0VF96 1302 aa9.8□□□□□ -0.84
C11orf88-203ENST00000529167 CTIFO43310 598 aaKnown RBP9.79□□□□□ -0.84
C11orf88-203ENST00000529167 MCCP23508 829 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 CDCA8Q53HL2 280 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 PIBF1Q8WXW3 757 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 THSD7AQ9UPZ6 1657 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 CLSTN1O94985 981 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 R3HDM1Q15032 1099 aaKnown RBP9.79□□□□□ -0.84
C11orf88-203ENST00000529167 CHIC2Q9UKJ5 165 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 U2AF2P26368 475 aaKnown RBP eCLIP9.79□□□□□ -0.84
C11orf88-203ENST00000529167 TERF2Q15554 542 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 TSC1Q92574 1164 aa9.79□□□□□ -0.84
C11orf88-203ENST00000529167 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
C11orf88-203ENST00000529167 PDE3AQ14432 1141 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 CREBRFQ8IUR6 639 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 SPTLC3Q9NUV7 552 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 GOLGA6L22H0YM25 854 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 PHF14O94880 888 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 SYCP1Q15431 976 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 ZSCAN23Q3MJ62 389 aa9.78□□□□□ -0.84
C11orf88-203ENST00000529167 NUP188Q5SRE5 1749 aa9.77□□□□□ -0.84
C11orf88-203ENST00000529167 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.84
C11orf88-203ENST00000529167 OS9Q13438 667 aaPredicted RBP9.77□□□□□ -0.84
C11orf88-203ENST00000529167 FKBP5Q13451 457 aaPredicted RBP9.77□□□□□ -0.84
C11orf88-203ENST00000529167 TRIM34Q9BYJ4 488 aa9.77□□□□□ -0.84
C11orf88-203ENST00000529167 SH3BP1Q9Y3L3 701 aa9.77□□□□□ -0.84
C11orf88-203ENST00000529167 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.84
C11orf88-203ENST00000529167 EN1Q05925 392 aaPredicted RBP9.77□□□□□ -0.85
C11orf88-203ENST00000529167 MORC2Q9Y6X9 1032 aaPredicted RBP9.77□□□□□ -0.85
C11orf88-203ENST00000529167 CLUAP1Q96AJ1 413 aa9.76□□□□□ -0.85
C11orf88-203ENST00000529167 NOLC1Q14978 699 aaKnown RBP eCLIP9.76□□□□□ -0.85
C11orf88-203ENST00000529167 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
C11orf88-203ENST00000529167 FMN2Q9NZ56 1722 aa9.76□□□□□ -0.85
C11orf88-203ENST00000529167 CC2D1BQ5T0F9 858 aaKnown RBP9.76□□□□□ -0.85
C11orf88-203ENST00000529167 FEZ2Q9UHY8 353 aaPredicted RBP9.76□□□□□ -0.85
C11orf88-203ENST00000529167 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
C11orf88-203ENST00000529167 MFAP1P55081 439 aaKnown RBP9.75□□□□□ -0.85
C11orf88-203ENST00000529167 CAMKK2Q96RR4 588 aa9.75□□□□□ -0.85
C11orf88-203ENST00000529167 CTNNA3Q9UI47 895 aa9.75□□□□□ -0.85
C11orf88-203ENST00000529167 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.75□□□□□ -0.85
C11orf88-203ENST00000529167 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
C11orf88-203ENST00000529167 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
C11orf88-203ENST00000529167 PLEKHH1Q9ULM0 1364 aa9.75□□□□□ -0.85
C11orf88-203ENST00000529167 SLFN5Q08AF3 891 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 TNS3Q68CZ2 1445 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 LOC102724159A0A0B4J2E5 919 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
C11orf88-203ENST00000529167 SEMA3FQ13275 785 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 PWP2Q15269 919 aaKnown RBP9.74□□□□□ -0.85
C11orf88-203ENST00000529167 ESCO1Q5FWF5 840 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 FAM53CQ9NYF3 392 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
C11orf88-203ENST00000529167 GOLGA2Q08379 1002 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 ROCK1Q13464 1354 aa9.74□□□□□ -0.85
C11orf88-203ENST00000529167 TECPR2O15040 1411 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 LRSAM1Q6UWE0 723 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 RAD50Q92878 1312 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
C11orf88-203ENST00000529167 KIF1BO60333 1816 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 FOXO3O43524 673 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 DIAPH3Q9NSV4 1193 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 CAMTA1Q9Y6Y1 1673 aa9.73□□□□□ -0.85
C11orf88-203ENST00000529167 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
C11orf88-203ENST00000529167 NOP2P46087 812 aaKnown RBP9.72□□□□□ -0.85
C11orf88-203ENST00000529167 EZH2Q15910 746 aaKnown RBP9.72□□□□□ -0.85
C11orf88-203ENST00000529167 RGL3Q3MIN7 710 aa9.72□□□□□ -0.85
C11orf88-203ENST00000529167 LMBRD1Q9NUN5 540 aa9.72□□□□□ -0.85
C11orf88-203ENST00000529167 DCAF8L1A6NGE4 600 aa9.72□□□□□ -0.85
C11orf88-203ENST00000529167 ZNF784Q8NCA9 323 aaPredicted RBP9.71□□□□□ -0.85
C11orf88-203ENST00000529167 STK26Q9P289 416 aa9.71□□□□□ -0.85
C11orf88-203ENST00000529167 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.85
C11orf88-203ENST00000529167 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
C11orf88-203ENST00000529167 CTR9Q6PD62 1173 aa9.71□□□□□ -0.86
C11orf88-203ENST00000529167 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
C11orf88-203ENST00000529167 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
C11orf88-203ENST00000529167 CASZ1Q86V15 1759 aa9.7□□□□□ -0.86
C11orf88-203ENST00000529167 C1QTNF8P60827 252 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms