RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ADAMTS7Q9UKP4 1686 aa32.12■■■□□ 2.73
LDLRAD3-203ENST00000528989 CABP4P57796 275 aa32.11■■■□□ 2.73
LDLRAD3-203ENST00000528989 EXOSC9Q06265 439 aaKnown RBP32.1■■■□□ 2.73
LDLRAD3-203ENST00000528989 SCN11AQ9UI33 1791 aa32.1■■■□□ 2.73
LDLRAD3-203ENST00000528989 BTBD11A6QL63 1104 aa32.1■■■□□ 2.73
LDLRAD3-203ENST00000528989 KCNQ3O43525 872 aa32.1■■■□□ 2.73
LDLRAD3-203ENST00000528989 ERVV-2B6SEH9 535 aa32.09■■■□□ 2.73
LDLRAD3-203ENST00000528989 RXRBP28702 533 aa32.09■■■□□ 2.73
LDLRAD3-203ENST00000528989 VIRMAQ69YN4 1812 aaKnown RBP32.09■■■□□ 2.73
LDLRAD3-203ENST00000528989 KRT24Q2M2I5 525 aa32.08■■■□□ 2.73
LDLRAD3-203ENST00000528989 SLC39A6Q13433 755 aa32.07■■■□□ 2.72
LDLRAD3-203ENST00000528989 ACSBG1Q96GR2 724 aa32.06■■■□□ 2.72
LDLRAD3-203ENST00000528989 ELL2O00472 640 aaPredicted RBP32.06■■■□□ 2.72
LDLRAD3-203ENST00000528989 TSPYL6Q8N831 410 aa32.06■■■□□ 2.72
LDLRAD3-203ENST00000528989 C8orf58Q8NAV2 365 aa32.05■■■□□ 2.72
LDLRAD3-203ENST00000528989 SYTL4Q96C24 671 aaPredicted RBP32.05■■■□□ 2.72
LDLRAD3-203ENST00000528989 PRIM1P49642 420 aaKnown RBP32.04■■■□□ 2.72
LDLRAD3-203ENST00000528989 TOGARAM1Q9Y4F4 1720 aa32.03■■■□□ 2.72
LDLRAD3-203ENST00000528989 EP400Q96L91 3159 aa32.03■■■□□ 2.72
LDLRAD3-203ENST00000528989 BABAM1Q9NWV8 329 aa32.03■■■□□ 2.72
LDLRAD3-203ENST00000528989 MRC1P22897 1456 aa32.02■■■□□ 2.72
LDLRAD3-203ENST00000528989 PIGBQ92521 554 aa32.02■■■□□ 2.72
LDLRAD3-203ENST00000528989 TMOD3Q9NYL9 352 aa32.01■■■□□ 2.72
LDLRAD3-203ENST00000528989 KCNQ2O43526 872 aa32■■■□□ 2.71
LDLRAD3-203ENST00000528989 ZNF790Q6PG37 636 aa31.99■■■□□ 2.71
LDLRAD3-203ENST00000528989 KAT6BQ8WYB5 2073 aa31.99■■■□□ 2.71
LDLRAD3-203ENST00000528989 SIPA1L3O60292 1781 aaPredicted RBP31.99■■■□□ 2.71
LDLRAD3-203ENST00000528989 EIF4A1P60842 406 aaKnown RBP31.98■■■□□ 2.71
LDLRAD3-203ENST00000528989 KRT27Q7Z3Y8 459 aa31.97■■■□□ 2.71
LDLRAD3-203ENST00000528989 RCAN3Q9UKA8 241 aa31.97■■■□□ 2.71
LDLRAD3-203ENST00000528989 PTF1AQ7RTS3 328 aa31.96■■■□□ 2.71
LDLRAD3-203ENST00000528989 VAMP4O75379 141 aa31.95■■■□□ 2.71
LDLRAD3-203ENST00000528989 TWISTNBQ3B726 338 aaPredicted RBP31.95■■■□□ 2.71
LDLRAD3-203ENST00000528989 ASAP1Q9ULH1 1129 aa31.95■■■□□ 2.71
LDLRAD3-203ENST00000528989 BCL9O00512 1426 aa31.94■■■□□ 2.7
LDLRAD3-203ENST00000528989 RGS12O14924 1447 aa31.93■■■□□ 2.7
LDLRAD3-203ENST00000528989 ZNF496Q96IT1 587 aaPredicted RBP31.93■■■□□ 2.7
LDLRAD3-203ENST00000528989 DOT1LQ8TEK3 1739 aa31.93■■■□□ 2.7
LDLRAD3-203ENST00000528989 BRWD3Q6RI45 1802 aa31.92■■■□□ 2.7
LDLRAD3-203ENST00000528989 TTC5Q8N0Z6 440 aa31.92■■■□□ 2.7
LDLRAD3-203ENST00000528989 SUPT16HQ9Y5B9 1047 aaKnown RBP31.92■■■□□ 2.7
LDLRAD3-203ENST00000528989 ATG3Q9NT62 314 aa31.91■■■□□ 2.7
LDLRAD3-203ENST00000528989 KDM3BQ7LBC6 1761 aa31.91■■■□□ 2.7
LDLRAD3-203ENST00000528989 PRAMEF22A3QJZ6 481 aa31.91■■■□□ 2.7
LDLRAD3-203ENST00000528989 ITGB4P16144 1822 aa31.91■■■□□ 2.7
LDLRAD3-203ENST00000528989 BCL2L13Q9BXK5 485 aa31.9■■■□□ 2.7
LDLRAD3-203ENST00000528989 TCERG1O14776 1098 aaKnown RBP31.89■■■□□ 2.7
LDLRAD3-203ENST00000528989 PTCD1O75127 700 aaKnown RBP31.89■■■□□ 2.7
LDLRAD3-203ENST00000528989 BCAR3O75815 825 aa31.89■■■□□ 2.7
LDLRAD3-203ENST00000528989 RARSP54136 660 aaKnown RBP31.89■■■□□ 2.69
LDLRAD3-203ENST00000528989 GIGYF1O75420 1035 aaPredicted RBP31.86■■■□□ 2.69
LDLRAD3-203ENST00000528989 CT47B1P0C2W7 299 aaPredicted RBP31.86■■■□□ 2.69
LDLRAD3-203ENST00000528989 HEG1Q9ULI3 1381 aa31.86■■■□□ 2.69
LDLRAD3-203ENST00000528989 NECTIN2Q92692 538 aa31.86■■■□□ 2.69
LDLRAD3-203ENST00000528989 SSH1Q8WYL5 1049 aa31.85■■■□□ 2.69
LDLRAD3-203ENST00000528989 FAM196AQ6ZSG2 479 aa31.84■■■□□ 2.69
LDLRAD3-203ENST00000528989 FMNL2Q96PY5 1086 aa31.84■■■□□ 2.69
LDLRAD3-203ENST00000528989 EIF2S2P20042 333 aaKnown RBP31.82■■■□□ 2.68
LDLRAD3-203ENST00000528989 RBM42Q9BTD8 480 aaKnown RBP31.81■■■□□ 2.68
LDLRAD3-203ENST00000528989 KCPQ6ZWJ8 1503 aa31.8■■■□□ 2.68
LDLRAD3-203ENST00000528989 PLIN1O60240 522 aa31.79■■■□□ 2.68
LDLRAD3-203ENST00000528989 USP16Q9Y5T5 823 aa31.79■■■□□ 2.68
LDLRAD3-203ENST00000528989 SNRPA1P09661 255 aaKnown RBP31.78■■■□□ 2.68
LDLRAD3-203ENST00000528989 SLC4A9Q96Q91 983 aa31.78■■■□□ 2.68
LDLRAD3-203ENST00000528989 SMC4Q9NTJ3 1288 aa31.78■■■□□ 2.68
LDLRAD3-203ENST00000528989 PAPPAQ13219 1627 aa31.78■■■□□ 2.68
LDLRAD3-203ENST00000528989 TRIM37O94972 964 aa31.78■■■□□ 2.68
LDLRAD3-203ENST00000528989 HDGFL1Q5TGJ6 251 aa31.77■■■□□ 2.68
LDLRAD3-203ENST00000528989 ZNF428Q96B54 188 aa31.76■■■□□ 2.68
LDLRAD3-203ENST00000528989 HOXB7P09629 217 aa31.76■■■□□ 2.67
LDLRAD3-203ENST00000528989 ALDH1L2Q3SY69 923 aa31.75■■■□□ 2.67
LDLRAD3-203ENST00000528989 BCL11BQ9C0K0 894 aaPredicted RBP31.75■■■□□ 2.67
LDLRAD3-203ENST00000528989 UBR2Q8IWV8 1755 aa31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 SBF2Q86WG5 1849 aa31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 PALLDQ8WX93 1383 aa31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 SOS1Q07889 1333 aaPredicted RBP31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 CCDC30Q5VVM6 783 aa31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 MRPL50Q8N5N7 158 aaKnown RBP31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 FRAT1Q92837 279 aaPredicted RBP31.73■■■□□ 2.67
LDLRAD3-203ENST00000528989 SLC4A2P04920 1241 aa31.72■■■□□ 2.67
LDLRAD3-203ENST00000528989 NHSQ6T4R5 1651 aa31.72■■■□□ 2.67
LDLRAD3-203ENST00000528989 RNF123Q5XPI4 1314 aa31.72■■■□□ 2.67
LDLRAD3-203ENST00000528989 RRP1P56182 461 aaKnown RBP31.71■■■□□ 2.67
LDLRAD3-203ENST00000528989 DNAJC10Q8IXB1 793 aa31.71■■■□□ 2.67
LDLRAD3-203ENST00000528989 ANXA1P04083 346 aa31.7■■■□□ 2.67
LDLRAD3-203ENST00000528989 KCNQ4P56696 695 aa31.7■■■□□ 2.67
LDLRAD3-203ENST00000528989 SMARCC1Q92922 1105 aaPredicted RBP31.7■■■□□ 2.67
LDLRAD3-203ENST00000528989 CHPF2Q9P2E5 772 aa31.7■■■□□ 2.67
LDLRAD3-203ENST00000528989 LOC102724428A0A0B4J2F2 783 aa31.69■■■□□ 2.66
LDLRAD3-203ENST00000528989 PIP4K2AP48426 406 aaPredicted RBP31.69■■■□□ 2.66
LDLRAD3-203ENST00000528989 SIK1P57059 783 aa31.69■■■□□ 2.66
LDLRAD3-203ENST00000528989 C5P01031 1676 aa31.69■■■□□ 2.66
LDLRAD3-203ENST00000528989 VSIG10Q8N0Z9 540 aa31.69■■■□□ 2.66
LDLRAD3-203ENST00000528989 NOB1Q9ULX3 412 aaKnown RBP31.69■■■□□ 2.66
LDLRAD3-203ENST00000528989 IRX6P78412 446 aaPredicted RBP31.68■■■□□ 2.66
LDLRAD3-203ENST00000528989 PROSER3Q2NL68 480 aa31.68■■■□□ 2.66
LDLRAD3-203ENST00000528989 BTAF1O14981 1849 aa31.68■■■□□ 2.66
LDLRAD3-203ENST00000528989 G2E3Q7L622 706 aa31.67■■■□□ 2.66
LDLRAD3-203ENST00000528989 STK31Q9BXU1 1019 aa31.67■■■□□ 2.66
LDLRAD3-203ENST00000528989 ATP6V1AP38606 617 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms