RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SBF1O95248 1867 aa10.49□□□□□ -0.73
VPS26B-204ENST00000527586 CYP4F22Q6NT55 531 aa10.48□□□□□ -0.73
VPS26B-204ENST00000527586 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 CHRNA5P30532 468 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 TMF1P82094 1093 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 NLGN1Q8N2Q7 840 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 PARP3Q9Y6F1 533 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 TOGARAM1Q9Y4F4 1720 aa10.47□□□□□ -0.73
VPS26B-204ENST00000527586 BRCA1P38398 1863 aaKnown RBP10.47□□□□□ -0.73
VPS26B-204ENST00000527586 CASP8AP2Q9UKL3 1982 aa10.46□□□□□ -0.73
VPS26B-204ENST00000527586 AOC2O75106 756 aa10.46□□□□□ -0.73
VPS26B-204ENST00000527586 MPNDQ8N594 471 aa10.46□□□□□ -0.73
VPS26B-204ENST00000527586 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
VPS26B-204ENST00000527586 C4BP0C0L5 1744 aa10.46□□□□□ -0.74
VPS26B-204ENST00000527586 LTBP1Q14766 1721 aa10.46□□□□□ -0.74
VPS26B-204ENST00000527586 GNPATO15228 680 aa10.45□□□□□ -0.74
VPS26B-204ENST00000527586 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
VPS26B-204ENST00000527586 DOT1LQ8TEK3 1739 aa10.44□□□□□ -0.74
VPS26B-204ENST00000527586 MAP2K2P36507 400 aa10.44□□□□□ -0.74
VPS26B-204ENST00000527586 EAPPQ56P03 285 aaPredicted RBP10.44□□□□□ -0.74
VPS26B-204ENST00000527586 ANKRD24Q8TF21 1146 aa10.44□□□□□ -0.74
VPS26B-204ENST00000527586 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
VPS26B-204ENST00000527586 IQCA1LA6NCM1 817 aa10.43□□□□□ -0.74
VPS26B-204ENST00000527586 CNTROBQ8N137 903 aa10.43□□□□□ -0.74
VPS26B-204ENST00000527586 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
VPS26B-204ENST00000527586 TAF1DQ9H5J8 278 aaPredicted RBP10.43□□□□□ -0.74
VPS26B-204ENST00000527586 THSD7BQ9C0I4 1608 aa10.43□□□□□ -0.74
VPS26B-204ENST00000527586 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
VPS26B-204ENST00000527586 ADAMTS7Q9UKP4 1686 aa10.42□□□□□ -0.74
VPS26B-204ENST00000527586 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
VPS26B-204ENST00000527586 ERFEQ4G0M1 354 aa10.42□□□□□ -0.74
VPS26B-204ENST00000527586 UBR3Q6ZT12 1888 aa10.42□□□□□ -0.74
VPS26B-204ENST00000527586 NFKBIEO00221 500 aa10.41□□□□□ -0.74
VPS26B-204ENST00000527586 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
VPS26B-204ENST00000527586 MAP1SQ66K74 1059 aaPredicted RBP10.41□□□□□ -0.74
VPS26B-204ENST00000527586 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
VPS26B-204ENST00000527586 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
VPS26B-204ENST00000527586 SZT2Q5T011 3432 aa10.4□□□□□ -0.74
VPS26B-204ENST00000527586 TRAPPC3LQ5T215 181 aa10.4□□□□□ -0.74
VPS26B-204ENST00000527586 MPRIPQ6WCQ1 1025 aa10.4□□□□□ -0.74
VPS26B-204ENST00000527586 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
VPS26B-204ENST00000527586 TIAM2Q8IVF5 1701 aa10.4□□□□□ -0.74
VPS26B-204ENST00000527586 C4AP0C0L4 1744 aa10.39□□□□□ -0.75
VPS26B-204ENST00000527586 GYS1P13807 737 aa10.39□□□□□ -0.75
VPS26B-204ENST00000527586 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
VPS26B-204ENST00000527586 DDX21Q9NR30 783 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS26B-204ENST00000527586 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
VPS26B-204ENST00000527586 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
VPS26B-204ENST00000527586 MEGF6O75095 1541 aa10.38□□□□□ -0.75
VPS26B-204ENST00000527586 SRPK2P78362 688 aaKnown RBP10.37□□□□□ -0.75
VPS26B-204ENST00000527586 CIAPIN1Q6FI81 312 aa10.37□□□□□ -0.75
VPS26B-204ENST00000527586 CABP1Q9NZU7 370 aa10.37□□□□□ -0.75
VPS26B-204ENST00000527586 NFAT5O94916 1531 aa10.37□□□□□ -0.75
VPS26B-204ENST00000527586 LOC102724428A0A0B4J2F2 783 aa10.36□□□□□ -0.75
VPS26B-204ENST00000527586 SIK1P57059 783 aa10.36□□□□□ -0.75
VPS26B-204ENST00000527586 FMR1Q06787 632 aaKnown RBP eCLIP10.36□□□□□ -0.75
VPS26B-204ENST00000527586 ARHGEF1Q92888 912 aaKnown RBP10.36□□□□□ -0.75
VPS26B-204ENST00000527586 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
VPS26B-204ENST00000527586 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
VPS26B-204ENST00000527586 RTCBQ9Y3I0 505 aaKnown RBP10.36□□□□□ -0.75
VPS26B-204ENST00000527586 TLL2Q9Y6L7 1015 aa10.36□□□□□ -0.75
VPS26B-204ENST00000527586 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
VPS26B-204ENST00000527586 ITPK1Q13572 414 aa10.35□□□□□ -0.75
VPS26B-204ENST00000527586 CTU1Q7Z7A3 348 aaKnown RBP10.35□□□□□ -0.75
VPS26B-204ENST00000527586 EPHX2P34913 555 aa10.34□□□□□ -0.75
VPS26B-204ENST00000527586 RFC4P35249 363 aa10.34□□□□□ -0.75
VPS26B-204ENST00000527586 TTLL6Q8N841 843 aa10.34□□□□□ -0.75
VPS26B-204ENST00000527586 LTV1Q96GA3 475 aaPredicted RBP10.34□□□□□ -0.75
VPS26B-204ENST00000527586 HACL1Q9UJ83 578 aa10.34□□□□□ -0.75
VPS26B-204ENST00000527586 DDR1Q08345 913 aa10.33□□□□□ -0.76
VPS26B-204ENST00000527586 CST9Q5W186 159 aa10.33□□□□□ -0.76
VPS26B-204ENST00000527586 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
VPS26B-204ENST00000527586 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
VPS26B-204ENST00000527586 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
VPS26B-204ENST00000527586 COL25A1Q9BXS0 654 aaPredicted RBP10.32□□□□□ -0.76
VPS26B-204ENST00000527586 ADRA2BP18089 450 aa10.31□□□□□ -0.76
VPS26B-204ENST00000527586 PIGBQ92521 554 aa10.31□□□□□ -0.76
VPS26B-204ENST00000527586 COL6A3P12111 3177 aa10.3□□□□□ -0.76
VPS26B-204ENST00000527586 ZIC5Q96T25 663 aa10.3□□□□□ -0.76
VPS26B-204ENST00000527586 TTC21AQ8NDW8 1320 aa10.3□□□□□ -0.76
VPS26B-204ENST00000527586 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
VPS26B-204ENST00000527586 TRAF5O00463 557 aa10.29□□□□□ -0.76
VPS26B-204ENST00000527586 FKBP8Q14318 412 aa10.29□□□□□ -0.76
VPS26B-204ENST00000527586 SAPCD2Q86UD0 394 aa10.29□□□□□ -0.76
VPS26B-204ENST00000527586 POLRMTO00411 1230 aaKnown RBP10.28□□□□□ -0.76
VPS26B-204ENST00000527586 C21orf2O43822 256 aa10.28□□□□□ -0.76
VPS26B-204ENST00000527586 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
VPS26B-204ENST00000527586 TAOK3Q9H2K8 898 aa10.28□□□□□ -0.76
VPS26B-204ENST00000527586 SAGE1Q9NXZ1 904 aa10.28□□□□□ -0.76
VPS26B-204ENST00000527586 SRP68Q9UHB9 627 aaKnown RBP10.28□□□□□ -0.76
VPS26B-204ENST00000527586 ADAMTSL1Q8N6G6 1762 aa10.28□□□□□ -0.76
VPS26B-204ENST00000527586 PKN2Q16513 984 aaKnown RBP10.27□□□□□ -0.77
VPS26B-204ENST00000527586 C2CD5Q86YS7 1000 aa10.27□□□□□ -0.77
VPS26B-204ENST00000527586 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
VPS26B-204ENST00000527586 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.77
VPS26B-204ENST00000527586 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
VPS26B-204ENST00000527586 SCN4AP35499 1836 aa10.27□□□□□ -0.77
VPS26B-204ENST00000527586 RNF123Q5XPI4 1314 aa10.27□□□□□ -0.77
VPS26B-204ENST00000527586 RPS6KA4O75676 772 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms