RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
CTSB-214ENST00000527243 LRP5O75197 1615 aa14.97□□□□□ -0.01
CTSB-214ENST00000527243 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
CTSB-214ENST00000527243 SLC4A9Q96Q91 983 aa14.97□□□□□ -0.01
CTSB-214ENST00000527243 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
CTSB-214ENST00000527243 SLC52A2Q9HAB3 445 aa14.97□□□□□ -0.01
CTSB-214ENST00000527243 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
CTSB-214ENST00000527243 IL17REQ8NFR9 667 aa14.96□□□□□ -0.01
CTSB-214ENST00000527243 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
CTSB-214ENST00000527243 ITPK1Q13572 414 aa14.95□□□□□ -0.02
CTSB-214ENST00000527243 PNPLA7Q6ZV29 1317 aa14.94□□□□□ -0.02
CTSB-214ENST00000527243 HMGB2P26583 209 aaKnown RBP14.93□□□□□ -0.02
CTSB-214ENST00000527243 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
CTSB-214ENST00000527243 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
CTSB-214ENST00000527243 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
CTSB-214ENST00000527243 TAF1LQ8IZX4 1826 aa14.92□□□□□ -0.02
CTSB-214ENST00000527243 AMIGO3Q86WK7 504 aa14.92□□□□□ -0.02
CTSB-214ENST00000527243 C5P01031 1676 aa14.92□□□□□ -0.02
CTSB-214ENST00000527243 HTATSF1O43719 755 aaKnown RBP14.91□□□□□ -0.02
CTSB-214ENST00000527243 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
CTSB-214ENST00000527243 SGIP1Q9BQI5 828 aa14.91□□□□□ -0.02
CTSB-214ENST00000527243 C4BP0C0L5 1744 aa14.91□□□□□ -0.02
CTSB-214ENST00000527243 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
CTSB-214ENST00000527243 PTGER2P43116 358 aa14.9□□□□□ -0.02
CTSB-214ENST00000527243 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
CTSB-214ENST00000527243 TFCP2L1Q9NZI6 479 aa14.9□□□□□ -0.02
CTSB-214ENST00000527243 CICQ96RK0 1608 aaPredicted RBP14.9□□□□□ -0.02
CTSB-214ENST00000527243 KCPQ6ZWJ8 1503 aa14.9□□□□□ -0.02
CTSB-214ENST00000527243 PTCD1O75127 700 aaKnown RBP14.89□□□□□ -0.03
CTSB-214ENST00000527243 ZBTB7AO95365 584 aa14.89□□□□□ -0.03
CTSB-214ENST00000527243 SLC39A6Q13433 755 aa14.89□□□□□ -0.03
CTSB-214ENST00000527243 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
CTSB-214ENST00000527243 SLC16A10Q8TF71 515 aa14.89□□□□□ -0.03
CTSB-214ENST00000527243 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
CTSB-214ENST00000527243 MTFR1LQ9H019 292 aa14.89□□□□□ -0.03
CTSB-214ENST00000527243 SIPA1L3O60292 1781 aaPredicted RBP14.88□□□□□ -0.03
CTSB-214ENST00000527243 TEFQ10587 303 aa14.88□□□□□ -0.03
CTSB-214ENST00000527243 RC3H1Q5TC82 1133 aaKnown RBP14.88□□□□□ -0.03
CTSB-214ENST00000527243 COL23A1Q86Y22 540 aaPredicted RBP14.88□□□□□ -0.03
CTSB-214ENST00000527243 PNNQ9H307 717 aaKnown RBP14.88□□□□□ -0.03
CTSB-214ENST00000527243 CNTNAP4Q9C0A0 1308 aa14.88□□□□□ -0.03
CTSB-214ENST00000527243 VIRMAQ69YN4 1812 aaKnown RBP14.87□□□□□ -0.03
CTSB-214ENST00000527243 DCTN1Q14203 1278 aa14.87□□□□□ -0.03
CTSB-214ENST00000527243 CCDC184Q52MB2 194 aa14.87□□□□□ -0.03
CTSB-214ENST00000527243 MCM10Q7L590 875 aa14.87□□□□□ -0.03
CTSB-214ENST00000527243 ADAMTS8Q9UP79 889 aa14.87□□□□□ -0.03
CTSB-214ENST00000527243 ZNF790Q6PG37 636 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 FLAD1Q8NFF5 587 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 AK7Q96M32 723 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 COL5A3P25940 1745 aaPredicted RBP14.86□□□□□ -0.03
CTSB-214ENST00000527243 TJP1Q07157 1748 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 COL24A1Q17RW2 1714 aa14.86□□□□□ -0.03
CTSB-214ENST00000527243 UBR2Q8IWV8 1755 aa14.85□□□□□ -0.03
CTSB-214ENST00000527243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.85□□□□□ -0.03
CTSB-214ENST00000527243 SSFA2P28290 1259 aa14.85□□□□□ -0.03
CTSB-214ENST00000527243 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
CTSB-214ENST00000527243 DNAJC10Q8IXB1 793 aa14.85□□□□□ -0.03
CTSB-214ENST00000527243 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
CTSB-214ENST00000527243 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
CTSB-214ENST00000527243 GNPATO15228 680 aa14.84□□□□□ -0.03
CTSB-214ENST00000527243 KCNQ3O43525 872 aa14.84□□□□□ -0.03
CTSB-214ENST00000527243 NEFMP07197 916 aa14.84□□□□□ -0.03
CTSB-214ENST00000527243 TMPOP42166 694 aaKnown RBP14.84□□□□□ -0.03
CTSB-214ENST00000527243 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.03
CTSB-214ENST00000527243 ZNF496Q96IT1 587 aaPredicted RBP14.84□□□□□ -0.03
CTSB-214ENST00000527243 MAPK8IP3Q9UPT6 1336 aa14.84□□□□□ -0.03
CTSB-214ENST00000527243 RPS6KA4O75676 772 aa14.83□□□□□ -0.04
CTSB-214ENST00000527243 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
CTSB-214ENST00000527243 CRKLP46109 303 aaKnown RBP14.83□□□□□ -0.04
CTSB-214ENST00000527243 INTS5Q6P9B9 1019 aaKnown RBP14.83□□□□□ -0.04
CTSB-214ENST00000527243 RUNDC1Q96C34 613 aa14.83□□□□□ -0.04
CTSB-214ENST00000527243 MYH14Q7Z406 1995 aaKnown RBP14.83□□□□□ -0.04
CTSB-214ENST00000527243 HEG1Q9ULI3 1381 aa14.83□□□□□ -0.04
CTSB-214ENST00000527243 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
CTSB-214ENST00000527243 ANP32CO43423 234 aa14.82□□□□□ -0.04
CTSB-214ENST00000527243 TAF7Q15545 349 aaPredicted RBP14.82□□□□□ -0.04
CTSB-214ENST00000527243 CCDC146Q8IYE0 955 aa14.82□□□□□ -0.04
CTSB-214ENST00000527243 DLG5Q8TDM6 1919 aa14.82□□□□□ -0.04
CTSB-214ENST00000527243 ADRA2BP18089 450 aa14.81□□□□□ -0.04
CTSB-214ENST00000527243 TTC5Q8N0Z6 440 aa14.81□□□□□ -0.04
CTSB-214ENST00000527243 THUMPD2Q9BTF0 503 aaKnown RBP14.81□□□□□ -0.04
CTSB-214ENST00000527243 RTCBQ9Y3I0 505 aaKnown RBP14.81□□□□□ -0.04
CTSB-214ENST00000527243 PHF14O94880 888 aa14.8□□□□□ -0.04
CTSB-214ENST00000527243 RIPK4P57078 832 aa14.8□□□□□ -0.04
CTSB-214ENST00000527243 PNISRQ8TF01 805 aaKnown RBP14.8□□□□□ -0.04
CTSB-214ENST00000527243 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
CTSB-214ENST00000527243 CCDC87Q9NVE4 849 aa14.8□□□□□ -0.04
CTSB-214ENST00000527243 SOS1Q07889 1333 aaPredicted RBP14.79□□□□□ -0.04
CTSB-214ENST00000527243 ARHGEF1Q92888 912 aaKnown RBP14.79□□□□□ -0.04
CTSB-214ENST00000527243 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
CTSB-214ENST00000527243 TRAPPC3LQ5T215 181 aa14.78□□□□□ -0.04
CTSB-214ENST00000527243 ZBTB1Q9Y2K1 713 aa14.78□□□□□ -0.04
CTSB-214ENST00000527243 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
CTSB-214ENST00000527243 MSH5O43196 834 aa14.77□□□□□ -0.05
CTSB-214ENST00000527243 LMOD3Q0VAK6 560 aa14.77□□□□□ -0.05
CTSB-214ENST00000527243 MSL1Q68DK7 614 aa14.77□□□□□ -0.05
CTSB-214ENST00000527243 ARXQ96QS3 562 aa14.77□□□□□ -0.05
CTSB-214ENST00000527243 TEX13AQ9BXU3 409 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 1011.8 ms