RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
TRIM49D2-201ENST00000526396 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
TRIM49D2-201ENST00000526396 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 SBF2Q86WG5 1849 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 APAF1O14727 1248 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 NFE2L2Q16236 605 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 IFNL2Q8IZJ0 200 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 DLG5Q8TDM6 1919 aa11.71□□□□□ -0.53
TRIM49D2-201ENST00000526396 NHSQ6T4R5 1651 aa11.71□□□□□ -0.54
TRIM49D2-201ENST00000526396 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
TRIM49D2-201ENST00000526396 BCL9O00512 1426 aa11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 TRIM37O94972 964 aa11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 MCM10Q7L590 875 aa11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
TRIM49D2-201ENST00000526396 FAM196AQ6ZSG2 479 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 SCN11AQ9UI33 1791 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 MRC1P22897 1456 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 DCAF5Q96JK2 942 aa11.69□□□□□ -0.54
TRIM49D2-201ENST00000526396 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
TRIM49D2-201ENST00000526396 ITGB4P16144 1822 aa11.68□□□□□ -0.54
TRIM49D2-201ENST00000526396 RIPK4P57078 832 aa11.68□□□□□ -0.54
TRIM49D2-201ENST00000526396 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
TRIM49D2-201ENST00000526396 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
TRIM49D2-201ENST00000526396 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
TRIM49D2-201ENST00000526396 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
TRIM49D2-201ENST00000526396 BTAF1O14981 1849 aa11.67□□□□□ -0.54
TRIM49D2-201ENST00000526396 NEFMP07197 916 aa11.67□□□□□ -0.54
TRIM49D2-201ENST00000526396 PIGBQ92521 554 aa11.67□□□□□ -0.54
TRIM49D2-201ENST00000526396 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRIM49D2-201ENST00000526396 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
TRIM49D2-201ENST00000526396 HSP90AB1P08238 724 aaKnown RBP11.65□□□□□ -0.54
TRIM49D2-201ENST00000526396 CABP4P57796 275 aa11.65□□□□□ -0.54
TRIM49D2-201ENST00000526396 NFATC2IPQ8NCF5 419 aa11.65□□□□□ -0.54
TRIM49D2-201ENST00000526396 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
TRIM49D2-201ENST00000526396 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
TRIM49D2-201ENST00000526396 ERVV-2B6SEH9 535 aa11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 TMOD3Q9NYL9 352 aa11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
TRIM49D2-201ENST00000526396 APBA3O96018 575 aa11.63□□□□□ -0.55
TRIM49D2-201ENST00000526396 KCNQ4P56696 695 aa11.63□□□□□ -0.55
TRIM49D2-201ENST00000526396 SLC39A6Q13433 755 aa11.63□□□□□ -0.55
TRIM49D2-201ENST00000526396 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
TRIM49D2-201ENST00000526396 KCNQ3O43525 872 aa11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 ECM2O94769 699 aaPredicted RBP11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 PALLDQ8WX93 1383 aa11.62□□□□□ -0.55
TRIM49D2-201ENST00000526396 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
TRIM49D2-201ENST00000526396 TEFQ10587 303 aa11.61□□□□□ -0.55
TRIM49D2-201ENST00000526396 WWC1Q8IX03 1113 aa11.61□□□□□ -0.55
TRIM49D2-201ENST00000526396 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
TRIM49D2-201ENST00000526396 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
TRIM49D2-201ENST00000526396 EZH2Q15910 746 aaKnown RBP11.6□□□□□ -0.55
TRIM49D2-201ENST00000526396 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
TRIM49D2-201ENST00000526396 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 CAMKK2Q96RR4 588 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 LRRC4BQ9NT99 713 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 LY75O60449 1722 aa11.59□□□□□ -0.55
TRIM49D2-201ENST00000526396 RREB1Q92766 1687 aa11.58□□□□□ -0.56
TRIM49D2-201ENST00000526396 HNRNPUQ00839 825 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM49D2-201ENST00000526396 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
TRIM49D2-201ENST00000526396 TAF7Q15545 349 aaPredicted RBP11.58□□□□□ -0.56
TRIM49D2-201ENST00000526396 RGPD3A6NKT7 1758 aaPredicted RBP11.58□□□□□ -0.56
TRIM49D2-201ENST00000526396 RGPD4Q7Z3J3 1758 aa11.58□□□□□ -0.56
TRIM49D2-201ENST00000526396 PRAMEF22A3QJZ6 481 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 SOCS7O14512 581 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 ZNF496Q96IT1 587 aaPredicted RBP11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 TJP1Q07157 1748 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 NUP188Q5SRE5 1749 aa11.57□□□□□ -0.56
TRIM49D2-201ENST00000526396 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
TRIM49D2-201ENST00000526396 CHL1O00533 1208 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms