RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 MAP3K12Q12852 859 aa17.03■□□□□ 0.32
NCAPD3-203ENST00000525964 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
NCAPD3-203ENST00000525964 CBFA2T2O43439 604 aa17.02■□□□□ 0.32
NCAPD3-203ENST00000525964 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.32
NCAPD3-203ENST00000525964 BACH2Q9BYV9 841 aa17.02■□□□□ 0.32
NCAPD3-203ENST00000525964 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
NCAPD3-203ENST00000525964 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
NCAPD3-203ENST00000525964 CEP131Q9UPN4 1083 aa17.02■□□□□ 0.32
NCAPD3-203ENST00000525964 NAPBQ9H115 298 aa17.02■□□□□ 0.31
NCAPD3-203ENST00000525964 ANKIB1Q9P2G1 1089 aa17.02■□□□□ 0.31
NCAPD3-203ENST00000525964 ERLIN2O94905 339 aa17.02■□□□□ 0.31
NCAPD3-203ENST00000525964 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.31
NCAPD3-203ENST00000525964 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.31
NCAPD3-203ENST00000525964 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.31
NCAPD3-203ENST00000525964 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 TTC21BQ7Z4L5 1316 aa17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 SLF2Q8IX21 1173 aa17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 NOM1Q5C9Z4 860 aaKnown RBP17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 KRT28Q7Z3Y7 464 aa17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
NCAPD3-203ENST00000525964 SLC5A1P13866 664 aa17■□□□□ 0.31
NCAPD3-203ENST00000525964 TNIP1Q15025 636 aa17■□□□□ 0.31
NCAPD3-203ENST00000525964 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
NCAPD3-203ENST00000525964 CEBPAP49715 358 aaPredicted RBP17■□□□□ 0.31
NCAPD3-203ENST00000525964 HMGN5P82970 282 aaKnown RBP17■□□□□ 0.31
NCAPD3-203ENST00000525964 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 DESP17661 470 aa16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 CTCFLQ8NI51 663 aaPredicted RBP16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
NCAPD3-203ENST00000525964 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 A0A087WZG4 1122 aa16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 NUP62CLQ9H1M0 184 aa16.98■□□□□ 0.31
NCAPD3-203ENST00000525964 RNF41Q9H4P4 317 aaPredicted RBP16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 ZNF444Q8N0Y2 327 aaPredicted RBP16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
NCAPD3-203ENST00000525964 CCDC181Q5TID7 509 aa16.96■□□□□ 0.31
NCAPD3-203ENST00000525964 PPP1R12BO60237 982 aaPredicted RBP16.96■□□□□ 0.31
NCAPD3-203ENST00000525964 SPC24Q8NBT2 197 aa16.96■□□□□ 0.31
NCAPD3-203ENST00000525964 NSD2O96028 1365 aa16.96■□□□□ 0.31
NCAPD3-203ENST00000525964 SMTNL1A8MU46 457 aa16.96■□□□□ 0.31
NCAPD3-203ENST00000525964 ABCC5O15440 1437 aa16.96■□□□□ 0.3
NCAPD3-203ENST00000525964 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 LDHCP07864 332 aa16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 TRIM21P19474 475 aaKnown RBP16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 PTPRCP08575 1304 aa16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 KIF14Q15058 1648 aa16.95■□□□□ 0.3
NCAPD3-203ENST00000525964 NEFHP12036 1026 aa16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 PRPF40BQ6NWY9 871 aaKnown RBP16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 FLIIQ13045 1269 aa16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 RAB34Q9BZG1 259 aa16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 C14orf93Q9H972 538 aaKnown RBP16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 SH2B1Q9NRF2 756 aaPredicted RBP16.94■□□□□ 0.3
NCAPD3-203ENST00000525964 ZNF213O14771 459 aa16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 C6orf229H3BNL8 230 aa16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 MAP7D2Q96T17 732 aa16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 ZBTB3Q9H5J0 574 aa16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 F6X3S4 739 aa16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
NCAPD3-203ENST00000525964 RANBP6O60518 1105 aaKnown RBP16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 DNAI2Q9GZS0 605 aa16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 NCOA1Q15788 1441 aa16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 LDHAL6AQ6ZMR3 332 aa16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
NCAPD3-203ENST00000525964 GOLGA6L10A6NI86 522 aa16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 GPTP24298 496 aa16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 PPP4R3AQ6IN85 833 aa16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 SCAND2PQ9GZW5 306 aaPredicted RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 CCDC96Q2M329 555 aa16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
NCAPD3-203ENST00000525964 CUL5Q93034 780 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms