RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 KIF13AQ9H1H9 1805 aa17.83■□□□□ 0.45
LTBP3-204ENST00000525443 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.45
LTBP3-204ENST00000525443 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.45
LTBP3-204ENST00000525443 KMT5BQ4FZB7 885 aa17.83■□□□□ 0.45
LTBP3-204ENST00000525443 SPC24Q8NBT2 197 aa17.83■□□□□ 0.45
LTBP3-204ENST00000525443 POLR3AO14802 1390 aaPredicted RBP17.83■□□□□ 0.45
LTBP3-204ENST00000525443 LMOD3Q0VAK6 560 aa17.83■□□□□ 0.44
LTBP3-204ENST00000525443 AXDND1Q5T1B0 1012 aaPredicted RBP17.83■□□□□ 0.44
LTBP3-204ENST00000525443 C10orf67Q8IYJ2 551 aa17.83■□□□□ 0.44
LTBP3-204ENST00000525443 ZNF622Q969S3 477 aaKnown RBP eCLIP17.83■□□□□ 0.44
LTBP3-204ENST00000525443 C16orf45Q96MC5 204 aaPredicted RBP17.83■□□□□ 0.44
LTBP3-204ENST00000525443 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.83■□□□□ 0.44
LTBP3-204ENST00000525443 V9GYY5 206 aaPredicted RBP17.83■□□□□ 0.44
LTBP3-204ENST00000525443 ALKQ9UM73 1620 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 TRIM66O15016 1216 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 SYCP1Q15431 976 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 NOL10Q9BSC4 688 aaKnown RBP17.82■□□□□ 0.44
LTBP3-204ENST00000525443 ARHGEF28Q8N1W1 1705 aaKnown RBP17.82■□□□□ 0.44
LTBP3-204ENST00000525443 PTPRMP28827 1452 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 TNRQ92752 1358 aa17.82■□□□□ 0.44
LTBP3-204ENST00000525443 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
LTBP3-204ENST00000525443 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
LTBP3-204ENST00000525443 FYB1O15117 783 aa17.81■□□□□ 0.44
LTBP3-204ENST00000525443 GPATCH11Q8N954 259 aa17.81■□□□□ 0.44
LTBP3-204ENST00000525443 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-204ENST00000525443 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-204ENST00000525443 CT47A1Q5JQC4 288 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-204ENST00000525443 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-204ENST00000525443 BANK1Q8NDB2 785 aa17.81■□□□□ 0.44
LTBP3-204ENST00000525443 RBM6P78332 1123 aaKnown RBP17.8■□□□□ 0.44
LTBP3-204ENST00000525443 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
LTBP3-204ENST00000525443 MYCBPQ99417 103 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-204ENST00000525443 SMTNL1A8MU46 457 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-204ENST00000525443 UVSSAQ2YD98 709 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 ICE2Q659A1 982 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 NEK11Q8NG66 645 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 METP08581 1390 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 SYT10Q6XYQ8 523 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-204ENST00000525443 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 ZNF446Q9NWS9 450 aa17.79■□□□□ 0.44
LTBP3-204ENST00000525443 CCDC112Q8NEF3 446 aa17.78■□□□□ 0.44
LTBP3-204ENST00000525443 RTF1Q92541 710 aaKnown RBP17.78■□□□□ 0.44
LTBP3-204ENST00000525443 SMC4Q9NTJ3 1288 aa17.78■□□□□ 0.44
LTBP3-204ENST00000525443 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.44
LTBP3-204ENST00000525443 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.44
LTBP3-204ENST00000525443 GDPD2Q9HCC8 539 aa17.77■□□□□ 0.44
LTBP3-204ENST00000525443 FAM53CQ9NYF3 392 aa17.77■□□□□ 0.44
LTBP3-204ENST00000525443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.77■□□□□ 0.44
LTBP3-204ENST00000525443 DZIP1LQ8IYY4 767 aaKnown RBP17.77■□□□□ 0.44
LTBP3-204ENST00000525443 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
LTBP3-204ENST00000525443 GTF3C6Q969F1 213 aa17.77■□□□□ 0.44
LTBP3-204ENST00000525443 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
LTBP3-204ENST00000525443 NUTM2FA1L443 756 aa17.77■□□□□ 0.43
LTBP3-204ENST00000525443 FBLN1P23142 703 aa17.77■□□□□ 0.43
LTBP3-204ENST00000525443 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.77■□□□□ 0.43
LTBP3-204ENST00000525443 BMP2KLQ5H9B9 411 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 FBXO38Q6PIJ6 1188 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 CWC22Q9HCG8 908 aaKnown RBP17.76■□□□□ 0.43
LTBP3-204ENST00000525443 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 NSD2O96028 1365 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 AP5Z1O43299 807 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 KDM4AO75164 1064 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 GADD45BO75293 160 aaPredicted RBP17.76■□□□□ 0.43
LTBP3-204ENST00000525443 TNNT1P13805 278 aa17.76■□□□□ 0.43
LTBP3-204ENST00000525443 ABCC11Q96J66 1382 aa17.75■□□□□ 0.43
LTBP3-204ENST00000525443 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-204ENST00000525443 RABEP1Q15276 862 aa17.75■□□□□ 0.43
LTBP3-204ENST00000525443 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
LTBP3-204ENST00000525443 WASLO00401 505 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-204ENST00000525443 NUCB1Q02818 461 aa17.75■□□□□ 0.43
LTBP3-204ENST00000525443 ZNF592Q92610 1267 aa17.75■□□□□ 0.43
LTBP3-204ENST00000525443 MYO1CO00159 1063 aa17.74■□□□□ 0.43
LTBP3-204ENST00000525443 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
LTBP3-204ENST00000525443 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-204ENST00000525443 LTKP29376 864 aa17.74■□□□□ 0.43
LTBP3-204ENST00000525443 CASQ1P31415 396 aa17.74■□□□□ 0.43
LTBP3-204ENST00000525443 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
LTBP3-204ENST00000525443 PHF14O94880 888 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 REC8O95072 547 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 NPHP1O15259 732 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 PTGS1P23219 599 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 KRBA2Q6ZNG9 492 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 TMEM2Q9UHN6 1383 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
LTBP3-204ENST00000525443 CREBRFQ8IUR6 639 aa17.72■□□□□ 0.43
LTBP3-204ENST00000525443 DRC1Q96MC2 740 aa17.72■□□□□ 0.43
LTBP3-204ENST00000525443 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
LTBP3-204ENST00000525443 CARD10Q9BWT7 1032 aa17.72■□□□□ 0.43
LTBP3-204ENST00000525443 GUCY2CP25092 1073 aa17.71■□□□□ 0.43
LTBP3-204ENST00000525443 ZNF215Q9UL58 517 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms