RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
USP47-206ENST00000525367 ETNK1Q9HBU6 452 aa8.24□□□□□ -1.09
USP47-206ENST00000525367 RAB6BQ9NRW1 208 aa8.24□□□□□ -1.09
USP47-206ENST00000525367 SERPINB4P48594 390 aa8.23□□□□□ -1.09
USP47-206ENST00000525367 NR5A1Q13285 461 aa8.23□□□□□ -1.09
USP47-206ENST00000525367 NNTQ13423 1086 aa8.23□□□□□ -1.09
USP47-206ENST00000525367 TMCO4Q5TGY1 634 aa8.23□□□□□ -1.09
USP47-206ENST00000525367 HINFPQ9BQA5 517 aa8.23□□□□□ -1.09
USP47-206ENST00000525367 SERTAD1Q9UHV2 236 aa8.23□□□□□ -1.09
USP47-206ENST00000525367 J3QL48 77 aa8.22□□□□□ -1.09
USP47-206ENST00000525367 GDF10P55107 478 aa8.22□□□□□ -1.09
USP47-206ENST00000525367 DHX9Q08211 1270 aaKnown RBP8.22□□□□□ -1.09
USP47-206ENST00000525367 CBLBQ13191 982 aa8.22□□□□□ -1.09
USP47-206ENST00000525367 CAPN12Q6ZSI9 719 aa8.22□□□□□ -1.09
USP47-206ENST00000525367 CCDC125Q86Z20 511 aa8.22□□□□□ -1.09
USP47-206ENST00000525367 MKNK1Q9BUB5 465 aa8.22□□□□□ -1.09
USP47-206ENST00000525367 CXXC1Q9P0U4 656 aaPredicted RBP8.22□□□□□ -1.09
USP47-206ENST00000525367 RBM19Q9Y4C8 960 aaKnown RBP8.22□□□□□ -1.09
USP47-206ENST00000525367 B4GALNT3Q6L9W6 998 aa8.21□□□□□ -1.1
USP47-206ENST00000525367 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
USP47-206ENST00000525367 CYP4X1Q8N118 509 aa8.21□□□□□ -1.1
USP47-206ENST00000525367 ARHGEF10LQ9HCE6 1279 aa8.21□□□□□ -1.1
USP47-206ENST00000525367 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.1
USP47-206ENST00000525367 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
USP47-206ENST00000525367 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
USP47-206ENST00000525367 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
USP47-206ENST00000525367 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
USP47-206ENST00000525367 TERTO14746 1132 aaKnown RBP8.19□□□□□ -1.1
USP47-206ENST00000525367 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
USP47-206ENST00000525367 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
USP47-206ENST00000525367 KDF1Q8NAX2 398 aaPredicted RBP8.19□□□□□ -1.1
USP47-206ENST00000525367 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
USP47-206ENST00000525367 WASF2Q9Y6W5 498 aa8.19□□□□□ -1.1
USP47-206ENST00000525367 IL2RAP01589 272 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 INHAP05111 366 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 WEE1P30291 646 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 EPHA4P54764 986 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 SNIP1Q8TAD8 396 aaKnown RBP8.18□□□□□ -1.1
USP47-206ENST00000525367 AGBL1Q96MI9 1066 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 TSPAN10Q9H1Z9 355 aaPredicted RBP8.18□□□□□ -1.1
USP47-206ENST00000525367 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 USP3Q9Y6I4 520 aa8.18□□□□□ -1.1
USP47-206ENST00000525367 M0R2N6 131 aa8.17□□□□□ -1.1
USP47-206ENST00000525367 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
USP47-206ENST00000525367 ZNF211Q13398 564 aaPredicted RBP8.17□□□□□ -1.1
USP47-206ENST00000525367 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP47-206ENST00000525367 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
USP47-206ENST00000525367 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
USP47-206ENST00000525367 MTMR7Q9Y216 660 aa8.17□□□□□ -1.1
USP47-206ENST00000525367 TTC24A2A3L6 582 aaPredicted RBP8.16□□□□□ -1.1
USP47-206ENST00000525367 C21orf2O43822 256 aa8.16□□□□□ -1.1
USP47-206ENST00000525367 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
USP47-206ENST00000525367 ADH1AP07327 375 aa8.16□□□□□ -1.1
USP47-206ENST00000525367 SMPD1P17405 629 aa8.16□□□□□ -1.1
USP47-206ENST00000525367 ARID4AP29374 1257 aaPredicted RBP8.16□□□□□ -1.1
USP47-206ENST00000525367 TAS1R3Q7RTX0 852 aa8.16□□□□□ -1.1
USP47-206ENST00000525367 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
USP47-206ENST00000525367 ATP13A2Q9NQ11 1180 aa8.16□□□□□ -1.1
USP47-206ENST00000525367 WASLO00401 505 aaPredicted RBP8.15□□□□□ -1.1
USP47-206ENST00000525367 TIMP2P16035 220 aa8.15□□□□□ -1.1
USP47-206ENST00000525367 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
USP47-206ENST00000525367 MTMR3Q13615 1198 aa8.15□□□□□ -1.1
USP47-206ENST00000525367 FOXD4L5Q5VV16 416 aaPredicted RBP8.15□□□□□ -1.1
USP47-206ENST00000525367 RGS22Q8NE09 1264 aa8.15□□□□□ -1.1
USP47-206ENST00000525367 C1orf216Q8TAB5 229 aa8.15□□□□□ -1.1
USP47-206ENST00000525367 SCG3Q8WXD2 468 aaKnown RBP8.15□□□□□ -1.1
USP47-206ENST00000525367 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
USP47-206ENST00000525367 TRIM47Q96LD4 638 aa8.15□□□□□ -1.1
USP47-206ENST00000525367 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
USP47-206ENST00000525367 ABL1P00519 1130 aa8.14□□□□□ -1.11
USP47-206ENST00000525367 GNRH1P01148 92 aa8.14□□□□□ -1.11
USP47-206ENST00000525367 CHMP7Q8WUX9 453 aaPredicted RBP8.14□□□□□ -1.11
USP47-206ENST00000525367 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
USP47-206ENST00000525367 FOXK2Q01167 660 aa8.13□□□□□ -1.11
USP47-206ENST00000525367 RELBQ01201 579 aa8.13□□□□□ -1.11
USP47-206ENST00000525367 NAA30Q147X3 362 aaPredicted RBP8.13□□□□□ -1.11
USP47-206ENST00000525367 HPS1Q92902 700 aa8.13□□□□□ -1.11
USP47-206ENST00000525367 ZNF395Q9H8N7 513 aaPredicted RBP8.13□□□□□ -1.11
USP47-206ENST00000525367 BACH1O14867 736 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 TLR1Q15399 786 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 SH3PXD2AQ5TCZ1 1133 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 Q6ZVU0 165 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 SLC9A9Q8IVB4 645 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 CNKSR1Q969H4 720 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 HRH3Q9Y5N1 445 aa8.12□□□□□ -1.11
USP47-206ENST00000525367 DNMT3AQ9Y6K1 912 aaPredicted RBP8.12□□□□□ -1.11
USP47-206ENST00000525367 ATAD2Q6PL18 1390 aa8.11□□□□□ -1.11
USP47-206ENST00000525367 A6NJY4 79 aa8.11□□□□□ -1.11
USP47-206ENST00000525367 MEN1O00255 615 aa8.11□□□□□ -1.11
USP47-206ENST00000525367 IGFBP4P22692 258 aa8.11□□□□□ -1.11
USP47-206ENST00000525367 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
USP47-206ENST00000525367 SMTNP53814 917 aa8.11□□□□□ -1.11
USP47-206ENST00000525367 CCDC27Q2M243 656 aa8.11□□□□□ -1.11
USP47-206ENST00000525367 GTF3C2Q8WUA4 911 aaPredicted RBP8.11□□□□□ -1.11
USP47-206ENST00000525367 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms