RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ABCA3Q99758 1704 aa9.4□□□□□ -0.9
CASP4-204ENST00000524843 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.9
CASP4-204ENST00000524843 PLEKHO1Q53GL0 409 aaPredicted RBP9.4□□□□□ -0.9
CASP4-204ENST00000524843 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
CASP4-204ENST00000524843 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
CASP4-204ENST00000524843 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.9
CASP4-204ENST00000524843 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
CASP4-204ENST00000524843 NHSL1Q5SYE7 1610 aa9.4□□□□□ -0.9
CASP4-204ENST00000524843 ERBB3P21860 1342 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 FOXO3O43524 673 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 CCDC30Q5VVM6 783 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 ANP32EQ9BTT0 268 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 RGPD5Q99666 1765 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 MRC1P22897 1456 aa9.39□□□□□ -0.91
CASP4-204ENST00000524843 SCN11AQ9UI33 1791 aa9.38□□□□□ -0.91
CASP4-204ENST00000524843 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
CASP4-204ENST00000524843 PLEKHG5O94827 1062 aa9.38□□□□□ -0.91
CASP4-204ENST00000524843 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
CASP4-204ENST00000524843 TAF7Q15545 349 aaPredicted RBP9.38□□□□□ -0.91
CASP4-204ENST00000524843 ANKRD24Q8TF21 1146 aa9.38□□□□□ -0.91
CASP4-204ENST00000524843 ATP10DQ9P241 1426 aa9.38□□□□□ -0.91
CASP4-204ENST00000524843 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
CASP4-204ENST00000524843 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
CASP4-204ENST00000524843 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
CASP4-204ENST00000524843 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
CASP4-204ENST00000524843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.915e-8■■■■□ 20
CASP4-204ENST00000524843 SPATA31A3Q5VYP0 1347 aa9.36□□□□□ -0.91
CASP4-204ENST00000524843 VASPP50552 380 aaPredicted RBP9.36□□□□□ -0.91
CASP4-204ENST00000524843 NUCB1Q02818 461 aa9.36□□□□□ -0.91
CASP4-204ENST00000524843 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
CASP4-204ENST00000524843 ZNF530Q6P9A1 599 aaPredicted RBP9.36□□□□□ -0.91
CASP4-204ENST00000524843 RPAP2Q8IXW5 612 aaPredicted RBP9.36□□□□□ -0.91
CASP4-204ENST00000524843 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
CASP4-204ENST00000524843 ZBTB47Q9UFB7 747 aaPredicted RBP9.36□□□□□ -0.91
CASP4-204ENST00000524843 ELL2O00472 640 aaPredicted RBP9.35□□□□□ -0.91
CASP4-204ENST00000524843 HMMRO75330 724 aa9.35□□□□□ -0.91
CASP4-204ENST00000524843 TEFQ10587 303 aa9.35□□□□□ -0.91
CASP4-204ENST00000524843 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
CASP4-204ENST00000524843 IL17REQ8NFR9 667 aa9.35□□□□□ -0.91
CASP4-204ENST00000524843 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
CASP4-204ENST00000524843 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
CASP4-204ENST00000524843 ANKRD44Q8N8A2 993 aa9.34□□□□□ -0.91
CASP4-204ENST00000524843 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
CASP4-204ENST00000524843 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
CASP4-204ENST00000524843 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
CASP4-204ENST00000524843 GNAI3P08754 354 aa9.33□□□□□ -0.92
CASP4-204ENST00000524843 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
CASP4-204ENST00000524843 XPCQ01831 940 aaPredicted RBP9.33□□□□□ -0.92
CASP4-204ENST00000524843 FLIIQ13045 1269 aa9.33□□□□□ -0.92
CASP4-204ENST00000524843 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
CASP4-204ENST00000524843 CHD1LQ86WJ1 897 aa9.33□□□□□ -0.92
CASP4-204ENST00000524843 USHBP1Q8N6Y0 703 aa9.33□□□□□ -0.92
CASP4-204ENST00000524843 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
CASP4-204ENST00000524843 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
CASP4-204ENST00000524843 HSPA2P54652 639 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 KRT24Q2M2I5 525 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 BMP2KLQ5H9B9 411 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 HDGFL1Q5TGJ6 251 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 BRINP3Q76B58 766 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 SKAP1Q86WV1 359 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 LRRC59Q96AG4 307 aaKnown RBP9.32□□□□□ -0.92
CASP4-204ENST00000524843 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
CASP4-204ENST00000524843 MEGF6O75095 1541 aa9.31□□□□□ -0.92
CASP4-204ENST00000524843 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
CASP4-204ENST00000524843 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
CASP4-204ENST00000524843 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
CASP4-204ENST00000524843 HDAC5Q9UQL6 1122 aa9.31□□□□□ -0.92
CASP4-204ENST00000524843 PLCH1Q4KWH8 1693 aa9.31□□□□□ -0.92
CASP4-204ENST00000524843 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
CASP4-204ENST00000524843 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
CASP4-204ENST00000524843 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
CASP4-204ENST00000524843 FKBP5Q13451 457 aaPredicted RBP9.3□□□□□ -0.92
CASP4-204ENST00000524843 BECN1Q14457 450 aa9.3□□□□□ -0.92
CASP4-204ENST00000524843 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
CASP4-204ENST00000524843 DCTPP1Q9H773 170 aa9.3□□□□□ -0.92
CASP4-204ENST00000524843 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
CASP4-204ENST00000524843 PAPPAQ13219 1627 aa9.3□□□□□ -0.92
CASP4-204ENST00000524843 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
CASP4-204ENST00000524843 GNAI2P04899 355 aa9.29□□□□□ -0.92
CASP4-204ENST00000524843 COL14A1Q05707 1796 aaKnown RBP9.29□□□□□ -0.92
CASP4-204ENST00000524843 C5P01031 1676 aa9.29□□□□□ -0.92
CASP4-204ENST00000524843 WDR17Q8IZU2 1322 aa9.29□□□□□ -0.92
CASP4-204ENST00000524843 UBR2Q8IWV8 1755 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 ZC3H6P61129 1189 aaKnown RBP9.28□□□□□ -0.92
CASP4-204ENST00000524843 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 SIRT2Q8IXJ6 389 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 TBC1D32Q96NH3 1257 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 MEIS3Q99687 375 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 NLRP2Q9NX02 1062 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 MIS18AQ9NYP9 233 aa9.28□□□□□ -0.92
CASP4-204ENST00000524843 DBF4Q9UBU7 674 aaPredicted RBP9.28□□□□□ -0.92
CASP4-204ENST00000524843 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms