RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
PACS1-202ENST00000524784 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
PACS1-202ENST00000524784 TTC5Q8N0Z6 440 aa13.61□□□□□ -0.23
PACS1-202ENST00000524784 TSPYL6Q8N831 410 aa13.61□□□□□ -0.23
PACS1-202ENST00000524784 CHMP4AQ9BY43 222 aa13.61□□□□□ -0.23
PACS1-202ENST00000524784 ATRNO75882 1429 aa13.61□□□□□ -0.23
PACS1-202ENST00000524784 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
PACS1-202ENST00000524784 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
PACS1-202ENST00000524784 BCAR3O75815 825 aa13.6□□□□□ -0.23
PACS1-202ENST00000524784 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
PACS1-202ENST00000524784 ALDH1L2Q3SY69 923 aa13.6□□□□□ -0.23
PACS1-202ENST00000524784 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
PACS1-202ENST00000524784 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
PACS1-202ENST00000524784 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
PACS1-202ENST00000524784 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
PACS1-202ENST00000524784 EIF4A1P60842 406 aaKnown RBP13.59□□□□□ -0.23
PACS1-202ENST00000524784 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
PACS1-202ENST00000524784 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
PACS1-202ENST00000524784 GTF3C3Q9Y5Q9 886 aa13.59□□□□□ -0.23
PACS1-202ENST00000524784 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
PACS1-202ENST00000524784 KCNQ3O43525 872 aa13.58□□□□□ -0.24
PACS1-202ENST00000524784 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.24
PACS1-202ENST00000524784 MARCH10Q8NA82 808 aaPredicted RBP13.58□□□□□ -0.24
PACS1-202ENST00000524784 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
PACS1-202ENST00000524784 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
PACS1-202ENST00000524784 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
PACS1-202ENST00000524784 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
PACS1-202ENST00000524784 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
PACS1-202ENST00000524784 HOXB7P09629 217 aa13.57□□□□□ -0.24
PACS1-202ENST00000524784 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
PACS1-202ENST00000524784 FKBP8Q14318 412 aa13.57□□□□□ -0.24
PACS1-202ENST00000524784 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
PACS1-202ENST00000524784 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
PACS1-202ENST00000524784 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
PACS1-202ENST00000524784 SYTL4Q96C24 671 aaPredicted RBP13.57□□□□□ -0.24
PACS1-202ENST00000524784 MRC1P22897 1456 aa13.56□□□□□ -0.24
PACS1-202ENST00000524784 PLIN1O60240 522 aa13.56□□□□□ -0.24
PACS1-202ENST00000524784 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
PACS1-202ENST00000524784 RBM6P78332 1123 aaKnown RBP13.56□□□□□ -0.24
PACS1-202ENST00000524784 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
PACS1-202ENST00000524784 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
PACS1-202ENST00000524784 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
PACS1-202ENST00000524784 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
PACS1-202ENST00000524784 MS4A1P11836 297 aa13.55□□□□□ -0.24
PACS1-202ENST00000524784 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
PACS1-202ENST00000524784 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
PACS1-202ENST00000524784 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
PACS1-202ENST00000524784 PIGBQ92521 554 aa13.55□□□□□ -0.24
PACS1-202ENST00000524784 GLI3P10071 1580 aa13.54□□□□□ -0.24
PACS1-202ENST00000524784 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
PACS1-202ENST00000524784 SNRPA1P09661 255 aaKnown RBP13.54□□□□□ -0.24
PACS1-202ENST00000524784 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
PACS1-202ENST00000524784 HDGFL1Q5TGJ6 251 aa13.54□□□□□ -0.24
PACS1-202ENST00000524784 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
PACS1-202ENST00000524784 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
PACS1-202ENST00000524784 KIF16BQ96L93 1317 aa13.54□□□□□ -0.24
PACS1-202ENST00000524784 RXRBP28702 533 aa13.53□□□□□ -0.24
PACS1-202ENST00000524784 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
PACS1-202ENST00000524784 ACSBG1Q96GR2 724 aa13.53□□□□□ -0.24
PACS1-202ENST00000524784 NOB1Q9ULX3 412 aaKnown RBP13.53□□□□□ -0.24
PACS1-202ENST00000524784 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
PACS1-202ENST00000524784 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 PDE3AQ14432 1141 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 NECTIN2Q92692 538 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
PACS1-202ENST00000524784 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
PACS1-202ENST00000524784 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
PACS1-202ENST00000524784 BCL9O00512 1426 aa13.51□□□□□ -0.25
PACS1-202ENST00000524784 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
PACS1-202ENST00000524784 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
PACS1-202ENST00000524784 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
PACS1-202ENST00000524784 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
PACS1-202ENST00000524784 FTSJ3Q8IY81 847 aaKnown RBP13.5□□□□□ -0.25
PACS1-202ENST00000524784 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
PACS1-202ENST00000524784 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
PACS1-202ENST00000524784 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
PACS1-202ENST00000524784 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
PACS1-202ENST00000524784 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
PACS1-202ENST00000524784 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
PACS1-202ENST00000524784 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
PACS1-202ENST00000524784 PTPRCP08575 1304 aa13.48□□□□□ -0.25
PACS1-202ENST00000524784 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
PACS1-202ENST00000524784 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
PACS1-202ENST00000524784 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
PACS1-202ENST00000524784 CLUAP1Q96AJ1 413 aa13.48□□□□□ -0.25
PACS1-202ENST00000524784 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 KCNQ2O43526 872 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 TRIM27P14373 513 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 FAM182BQ5T319 152 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 PANK1Q8TE04 598 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 CHPF2Q9P2E5 772 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 RGS17Q9UGC6 210 aaPredicted RBP13.47□□□□□ -0.25
PACS1-202ENST00000524784 USP16Q9Y5T5 823 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
PACS1-202ENST00000524784 STARD3NLO95772 234 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms