RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 NAPBQ9H115 298 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 EXOC5O00471 708 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 KIAA1328Q86T90 577 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 AKNAQ7Z591 1439 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 NESP48681 1621 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 CTNNBL1Q8WYA6 563 aaPredicted RBP12.3□□□□□ -0.44
CTSC-203ENST00000524463 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
CTSC-203ENST00000524463 ANKRD1Q15327 319 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 SAMM50Q9Y512 469 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 DRC1Q96MC2 740 aa12.3□□□□□ -0.44
CTSC-203ENST00000524463 GOLGA6L10A6NI86 522 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 CUX1P39880 1505 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 CDKL5O76039 1030 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
CTSC-203ENST00000524463 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
CTSC-203ENST00000524463 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
CTSC-203ENST00000524463 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 ERCC4Q92889 916 aaPredicted RBP12.29□□□□□ -0.44
CTSC-203ENST00000524463 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 DACH1Q9UI36 760 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 ANAPC15P60006 121 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 CUL5Q93034 780 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 DESP17661 470 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 EMILIN1Q9Y6C2 1016 aa12.29□□□□□ -0.44
CTSC-203ENST00000524463 CTNNA3Q9UI47 895 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 CCDC192P0DO97 292 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 SLC5A1P13866 664 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 FBLN1P23142 703 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 CALRP27797 417 aaKnown RBP12.28□□□□□ -0.44
CTSC-203ENST00000524463 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
CTSC-203ENST00000524463 HAND2P61296 217 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 KRT85P78386 507 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 ZRSR2Q15696 482 aaKnown RBP12.28□□□□□ -0.44
CTSC-203ENST00000524463 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
CTSC-203ENST00000524463 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 UBAP1LF5GYI3 381 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 USP8P40818 1118 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 PICALMQ13492 652 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
CTSC-203ENST00000524463 PANK2Q9BZ23 570 aa12.27□□□□□ -0.44
CTSC-203ENST00000524463 AMOTL2Q9Y2J4 779 aa12.27□□□□□ -0.44
CTSC-203ENST00000524463 ANXA1P04083 346 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 MVPQ14764 893 aaKnown RBP12.27□□□□□ -0.45
CTSC-203ENST00000524463 POGZQ7Z3K3 1410 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTSC-203ENST00000524463 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
CTSC-203ENST00000524463 ISM2Q6H9L7 571 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.45
CTSC-203ENST00000524463 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
CTSC-203ENST00000524463 NLRP5P59047 1200 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 CPLX3Q8WVH0 158 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
CTSC-203ENST00000524463 BRD4O60885 1362 aaPredicted RBP12.26□□□□□ -0.45
CTSC-203ENST00000524463 PLS1Q14651 629 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 CCDC112Q8NEF3 446 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 COMMD10Q9Y6G5 202 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 JAG2Q9Y219 1238 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
CTSC-203ENST00000524463 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
CTSC-203ENST00000524463 A0A087WZG4 1122 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 LRRC9Q6ZRR7 1453 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 CFAP100Q494V2 611 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 LUC7LQ9NQ29 371 aaKnown RBP12.25□□□□□ -0.45
CTSC-203ENST00000524463 SLC12A7Q9Y666 1083 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 TERF1P54274 439 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 ZNF354CQ86Y25 554 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
CTSC-203ENST00000524463 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
CTSC-203ENST00000524463 DDX46Q7L014 1031 aaKnown RBP12.24□□□□□ -0.45
CTSC-203ENST00000524463 TAF4BQ92750 862 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 BRPF3Q9ULD4 1205 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 NAIPQ13075 1403 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 GOLIM4O00461 696 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 TMPOP42166 694 aaKnown RBP12.24□□□□□ -0.45
CTSC-203ENST00000524463 IFIT3O14879 490 aaKnown RBP12.24□□□□□ -0.45
CTSC-203ENST00000524463 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 MCM2P49736 904 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 CTCFLQ8NI51 663 aaPredicted RBP12.24□□□□□ -0.45
CTSC-203ENST00000524463 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 ZNF287Q9HBT7 754 aa12.24□□□□□ -0.45
CTSC-203ENST00000524463 MBD3O95983 291 aa12.23□□□□□ -0.45
CTSC-203ENST00000524463 MRE11P49959 708 aa12.23□□□□□ -0.45
CTSC-203ENST00000524463 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
CTSC-203ENST00000524463 LARP1Q6PKG0 1096 aaKnown RBP12.23□□□□□ -0.45
CTSC-203ENST00000524463 WASF1Q92558 559 aa12.23□□□□□ -0.45
CTSC-203ENST00000524463 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms