RNA–Protein interactions for RNA: ENST00000524347.2

SGCD-204, Transcript of sarcoglycan delta, humanhuman

TSL 5

Gene SGCD, Length 739 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-204ENST00000524347 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
SGCD-204ENST00000524347 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
SGCD-204ENST00000524347 APAF1O14727 1248 aa16.96■□□□□ 0.31
SGCD-204ENST00000524347 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
SGCD-204ENST00000524347 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.31
SGCD-204ENST00000524347 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
SGCD-204ENST00000524347 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
SGCD-204ENST00000524347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
SGCD-204ENST00000524347 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
SGCD-204ENST00000524347 IFNL2Q8IZJ0 200 aa16.94■□□□□ 0.3
SGCD-204ENST00000524347 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
SGCD-204ENST00000524347 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
SGCD-204ENST00000524347 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
SGCD-204ENST00000524347 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
SGCD-204ENST00000524347 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
SGCD-204ENST00000524347 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
SGCD-204ENST00000524347 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
SGCD-204ENST00000524347 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
SGCD-204ENST00000524347 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
SGCD-204ENST00000524347 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
SGCD-204ENST00000524347 PHACTR3Q96KR7 559 aa16.92■□□□□ 0.3
SGCD-204ENST00000524347 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
SGCD-204ENST00000524347 UTRNP46939 3433 aa16.91■□□□□ 0.3
SGCD-204ENST00000524347 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
SGCD-204ENST00000524347 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
SGCD-204ENST00000524347 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
SGCD-204ENST00000524347 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
SGCD-204ENST00000524347 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
SGCD-204ENST00000524347 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
SGCD-204ENST00000524347 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
SGCD-204ENST00000524347 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
SGCD-204ENST00000524347 UBR3Q6ZT12 1888 aa16.89■□□□□ 0.29
SGCD-204ENST00000524347 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
SGCD-204ENST00000524347 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
SGCD-204ENST00000524347 ATG3Q9NT62 314 aa16.89■□□□□ 0.29
SGCD-204ENST00000524347 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
SGCD-204ENST00000524347 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
SGCD-204ENST00000524347 ITPK1Q13572 414 aa16.88■□□□□ 0.29
SGCD-204ENST00000524347 LINC00116Q8NCU8 138 aa16.88■□□□□ 0.29
SGCD-204ENST00000524347 FHDC1Q9C0D6 1143 aaPredicted RBP16.88■□□□□ 0.29
SGCD-204ENST00000524347 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
SGCD-204ENST00000524347 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
SGCD-204ENST00000524347 SIK1P57059 783 aa16.87■□□□□ 0.29
SGCD-204ENST00000524347 MSL1Q68DK7 614 aa16.87■□□□□ 0.29
SGCD-204ENST00000524347 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
SGCD-204ENST00000524347 MSH5O43196 834 aa16.86■□□□□ 0.29
SGCD-204ENST00000524347 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
SGCD-204ENST00000524347 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
SGCD-204ENST00000524347 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
SGCD-204ENST00000524347 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
SGCD-204ENST00000524347 MRC1P22897 1456 aa16.86■□□□□ 0.29
SGCD-204ENST00000524347 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
SGCD-204ENST00000524347 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
SGCD-204ENST00000524347 PHF14O94880 888 aa16.84■□□□□ 0.29
SGCD-204ENST00000524347 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
SGCD-204ENST00000524347 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
SGCD-204ENST00000524347 ARXQ96QS3 562 aa16.84■□□□□ 0.29
SGCD-204ENST00000524347 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
SGCD-204ENST00000524347 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
SGCD-204ENST00000524347 ERVV-2B6SEH9 535 aa16.83■□□□□ 0.28
SGCD-204ENST00000524347 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
SGCD-204ENST00000524347 TRMT2AQ8IZ69 625 aaKnown RBP16.83■□□□□ 0.28
SGCD-204ENST00000524347 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
SGCD-204ENST00000524347 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
SGCD-204ENST00000524347 AK7Q96M32 723 aa16.83■□□□□ 0.28
SGCD-204ENST00000524347 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
SGCD-204ENST00000524347 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
SGCD-204ENST00000524347 NEFMP07197 916 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
SGCD-204ENST00000524347 RIPK4P57078 832 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 CABP4P57796 275 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
SGCD-204ENST00000524347 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
SGCD-204ENST00000524347 IL16Q14005 1332 aa16.81■□□□□ 0.28
SGCD-204ENST00000524347 MYH14Q7Z406 1995 aaKnown RBP16.81■□□□□ 0.28
SGCD-204ENST00000524347 GOLGA2Q08379 1002 aa16.81■□□□□ 0.28
SGCD-204ENST00000524347 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
SGCD-204ENST00000524347 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
SGCD-204ENST00000524347 TJP1Q07157 1748 aa16.81■□□□□ 0.28
SGCD-204ENST00000524347 CEMIPQ8WUJ3 1361 aa16.8■□□□□ 0.28
SGCD-204ENST00000524347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
SGCD-204ENST00000524347 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
SGCD-204ENST00000524347 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
SGCD-204ENST00000524347 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
SGCD-204ENST00000524347 GNPATO15228 680 aa16.79■□□□□ 0.28
SGCD-204ENST00000524347 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
SGCD-204ENST00000524347 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
SGCD-204ENST00000524347 AKAP4Q5JQC9 854 aa16.79■□□□□ 0.28
SGCD-204ENST00000524347 E9PSI1 815 aa16.78■□□□□ 0.28
SGCD-204ENST00000524347 POLD1P28340 1107 aa16.78■□□□□ 0.28
SGCD-204ENST00000524347 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
SGCD-204ENST00000524347 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
SGCD-204ENST00000524347 SLC39A6Q13433 755 aa16.77■□□□□ 0.28
SGCD-204ENST00000524347 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
SGCD-204ENST00000524347 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
SGCD-204ENST00000524347 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
SGCD-204ENST00000524347 UBR2Q8IWV8 1755 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms